Pre_GI: BLASTP Hits

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Query: NC_007951:1768236:1780014 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1780014, End: 1780307, Length: 294

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015377:86847:960629606296364303Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencehypothetical protein8e-27119
NC_008767:1829500:183899318389931839265273Neisseria meningitidis FAM18, complete genomehypothetical protein3e-1373.9
NC_018868:4010615:402296440229644023326363Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein4e-1270.1
NC_013720:3925756:394010439401043940727624Pirellula staleyi DSM 6068, complete genomehypothetical protein6e-1063.2
NC_015167:1055145:107357010735701073896327Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein2e-0754.7
NC_013132:7204082:720908272090827209855774Chitinophaga pinensis DSM 2588, complete genomehypothetical protein2e-0651.2