Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4665793 Polaromonas sp. JS666, complete genome

Start: 4665793, End: 4666821, Length: 1029

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:4646344:4656182465618246572251044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 11e-171602
NC_007948:4620661:4621821462182146228641044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 19e-110397
NC_016590:1380092:1381197138119713823421146Burkholderia sp. YI23 chromosome 3, complete sequenceextracellular solute-binding protein3e-95348
NC_009328:3322802:3336523333652333376141092Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein1e-72273
NC_020210:3341976:3355714335571433568021089Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter substrate-binding protein6e-72271
NC_007005:2686551:2706875270687527079271053Pseudomonas syringae pv. syringae B728a, complete genomeextracellular solute-binding protein, family 13e-66252
NC_008391:2404443:2414978241497824160241047Burkholderia cepacia AMMD chromosome 2, complete sequenceextracellular solute-binding protein, family 13e-57222
NC_006510:2044347:2055331205533120564371107Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)4e-31135
NC_016641:1148220:1148220114822011492931074Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter substrate-binding protein5e-2098.6
NC_014483:5015890:5018463501846350195361074Paenibacillus polymyxa E681 chromosome, complete genomeSpermidine/putrescine-binding periplasmic protein2e-1996.7
NC_014010:1850500:1899804189980419008741071Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeABC transporter substrate-binding protein1e-1480.9
NC_011985:194973:2123562123562133961041Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter4e-1479.3
NC_012880:3748665:378308237830823784059978Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 16e-1065.1
NC_008054:1815723:1828034182803418290951062Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSpermidine/putrescine ABC transporter, substrate binding protein1e-0860.8
NC_006177:2943259:2964845296484529659421098Symbiobacterium thermophilum IAM 14863, complete genomeiron ABC transporter substrate-binding protein2e-0860.5
NC_008314:477722:5138795138795149041026Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: POPT family2e-0860.1
NC_013172:542896:5511245511245522031080Brachybacterium faecium DSM 4810, complete genomeABC-type Fe3+ transport system, periplasmic component7e-0755.1
NC_014306:2476316:2497276249727624983041029Erwinia billingiae Eb661, complete genomeABC transporter, periplasmic substrate-binding protein3e-0653.1
NC_010067:892729:902946902946903923978Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0652