Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4659571 Polaromonas sp. JS666, complete genome

Start: 4659571, End: 4659939, Length: 369

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:4558000:457382245738224574193372Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP2e-53207
NC_011144:2674242:269121226912122691571360Phenylobacterium zucineum HLK1, complete genometranslation initiation inhibitor, yjgF family1e-35148
NC_002947:4994335:503248050324805032833354Pseudomonas putida KT2440, complete genomehypothetical protein3e-25113
NC_010611:208268:231345231345231698354Acinetobacter baumannii ACICU, complete genomeputative translation initiation inhibitor, yjgF family6e-22102
NC_016147:1788219:179286217928621793203342Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeendoribonuclease l-psp protein3e-21100
NC_016027:2446806:244789724478972448247351Gluconacetobacter xylinus NBRC 3288, complete genometranslation initiation inhibitor6e-2199.4
NC_014924:1701952:172350917235091723853345Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeEndoribonuclease L-PSP1e-2098.6
NC_009085:1232890:125221212522121252520309Acinetobacter baumannii ATCC 17978, complete genomehypothetical protein3e-2097.1
NC_013209:2582878:261799526179952618345351Acetobacter pasteurianus IFO 3283-01, complete genometranslation initiation inhibitor YjgF5e-2096.3
NC_008700:3927896:394708839470883947441354Shewanella amazonensis SB2B, complete genomeconserved hypothetical translation initiation inhibitor, YjgF family7e-1992.4
NC_016513:1859767:186698918669891867342354Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative translation initiation inhibitor4e-1890.1
NC_007948:4620661:464117646411764641538363Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP6e-1889.4
NC_006677:1255079:125996212599621260312351Gluconobacter oxydans 621H, complete genomehypothetical protein6e-1889.4
NC_013416:1526920:153183815318381532191354Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative translation initiation inhibitor, YjgF family protein9e-1889
NC_015136:2282488:232364623236462323990345Burkholderia sp. CCGE1001 chromosome 1, complete sequenceendoribonuclease L-PSP1e-1788.6
NC_007948:4646344:467261646726164672984369Polaromonas sp. JS666, complete genomeEndoribonuclease L-PSP5e-1786.7
NC_013757:1343396:135492513549251355287363Geodermatophilus obscurus DSM 43160, complete genomeEndoribonuclease L-PSP8e-1785.5
NC_010125:955863:957436957436957786351Gluconacetobacter diazotrophicus PAl 5, complete genomeputative endoribonuclease1e-1684.7
NC_008752:620802:625054625054625431378Acidovorax avenae subsp. citrulli AAC00-1, complete genomeEndoribonuclease L-PSP2e-1581.3
NC_015724:339500:351931351931352311381Cupriavidus necator N-1 plasmid BB2p, complete sequenceendoribonuclease L-PSP2e-1477.8
NC_013282:2582720:260612826061282606472345Cronobacter turicensis, complete genomeUPF0076 protein yoaB5e-1476.6
NC_016002:2825017:283421028342102834527318Pseudogulbenkiania sp. NH8B, complete genomeendoribonuclease L-PSP family protein1e-1374.7
NC_015733:2581324:260361526036152603959345Pseudomonas putida S16 chromosome, complete genomeendoribonuclease L-PSP family protein5e-1270.1
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease1e-0961.6
NC_014632:113420:126595126595126978384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP6e-0856.2
NC_019978:1022209:102664010266401027026387Halobacteroides halobius DSM 5150, complete genomeendoribonuclease L-PSP, putative1e-0755.5