Pre_GI: BLASTP Hits

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Query: NC_007948:4620661:4630570 Polaromonas sp. JS666, complete genome

Start: 4630570, End: 4631688, Length: 1119

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:4646344:4654959465495946561101152Polaromonas sp. JS666, complete genomeExtracellular ligand-binding receptor6e-125447
NC_007948:360199:3792933792933804651173Polaromonas sp. JS666, complete genomeputative substrate-binding periplasmic (PBP) ABC transporter protein2e-107389
NC_007298:2947200:2965456296545629666821227Dechloromonas aromatica RCB, complete genomeExtracellular ligand-binding receptor1e-33144
NC_008781:708811:7256137256137267611149Polaromonas naphthalenivorans CJ2, complete genomeExtracellular ligand-binding receptor4e-33142
NC_007948:4620661:462417046241704624484315Polaromonas sp. JS666, complete genome8e-29128
NC_012856:1080000:1091343109134310924911149Ralstonia pickettii 12D chromosome 1, complete genomeExtracellular ligand-binding receptor5e-26118
NC_011386:1727203:1730320173032017315011182Oligotropha carboxidovorans OM5, complete genomeextracellular ligand-binding receptor1e-21104
NC_014931:2511423:2511423251142325125231101Variovorax paradoxus EPS chromosome, complete genomeExtracellular ligand-binding receptor5e-21102
NC_014844:2721746:2721746272174627230081263Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeextracellular ligand-binding receptor8e-1478.6
NC_010003:528855:5516155516155528261212Petrotoga mobilis SJ95, complete genomeExtracellular ligand-binding receptor8e-1478.2
NC_020453:4696000:4700666470066647022221557Agromonas oligotrophica S58 DNA, complete genomebranched-chain amino acid ABC transporter periplasmic protein6e-1272.4
NC_007948:4620661:464092746409274641061135Polaromonas sp. JS666, complete genome3e-0963.2
NC_017187:1424371:1437768143776814389221155Arcobacter butzleri ED-1, complete genomeleucine/isoleucine/valine-binding protein2e-0860.5
NC_009850:1498111:1511506151150615126601155Arcobacter butzleri RM4018, complete genomeleucine/isoleucine/valine-binding protein4e-0859.3
NC_013740:15401:1741117411185891179Acidaminococcus fermentans DSM 20731, complete genomeExtracellular ligand-binding receptor9e-0755.1
NC_009436:2685910:2687061268706126881821122Enterobacter sp. 638, complete genomeextracellular ligand-binding receptor1e-0654.3
NC_016633:1898234:1899184189918419003501167Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein1e-0654.3
NC_014837:1144500:1169762116976211709401179Pantoea sp. At-9b chromosome, complete genomeextracellular ligand-binding receptor4e-0653.1