Pre_GI: BLASTP Hits

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Query: NC_007948:1574881:1585982 Polaromonas sp. JS666, complete genome

Start: 1585982, End: 1586362, Length: 381

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015731:2811579:281922628192262819600375Nitrosomonas sp. Is79A3 chromosome, complete genomeXRE family transcriptional regulator2e-33140
NC_021150:3282702:329563132956313296008378Azotobacter vinelandii CA6, complete genometranscriptional regulatior protein5e-31132
NC_012560:3282704:329563332956333296010378Azotobacter vinelandii DJ, complete genometranscritional regulatior protein5e-31132
NC_012997:3651993:365574636557463656114369Teredinibacter turnerae T7901, complete genomehelix-turn-helix domain protein6e-31132
NC_010995:948041:972078972078972461384Cellvibrio japonicus Ueda107, complete genomehypothetical protein4e-30129
NC_013209:2582878:259546125954612595841381Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator helix turn helix domain1e-29128
NC_011901:2202690:221424522142452214619375Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetranscription regulator with HTH domain-containing protein3e-27120
NC_008571:938835:9997259997251000081357Gramella forsetii KT0803, complete genomeHTH_3 family transcriptional regulator protein1e-23108
NC_008783:222000:259768259768260124357Bartonella bacilliformis KC583, complete genomeputative HTH-type transcriptional regulator ygjM4e-23106
NC_020209:3262000:326389932638993264255357Pseudomonas poae RE*1-1-14, complete genomehypothetical protein6e-23105
NC_014217:2987450:300083130008313001205375Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, XRE family5e-22102
NC_015496:3256372:327014932701493270505357Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genometranscriptional regulator, XRE family8e-22102
NC_015638:3202491:320866532086653209021357Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeXRE family transcriptional regulator1e-21101
NC_010842:2310756:233692823369282337332405Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosometranscription regulator containing HTH domain8e-2199
NC_010602:2244729:233154123315412331945405Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'transcription regulator8e-2199
NC_013361:1558423:156937915693791570035657Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional regulator1e-1995.1
NC_014664:1614568:162657216265721626949378Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeputative transcription regulator with HTH domain6e-1992.8
NC_013850:2182337:219376921937692194347579Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family2e-1891.3
NC_018080:1730534:1742911174291117441371227Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-1684.3
NC_012796:4075583:4134464413446441356391176Desulfovibrio magneticus RS-1, complete genomeXre family DNA-binding protein2e-1684
NC_008044:857759:858001858001858372372Silicibacter sp. TM1040, complete genometranscriptional regulator, XRE family2e-1581.3
NC_010511:1273610:127900812790081279430423Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein9e-1579
NC_016616:1534983:1547546154754615487601215Dechlorosoma suillum PS chromosome, complete genomeputative transcription regulator containing HTH domain1e-1478.2
NC_008782:2568027:2608143260814326093721230Acidovorax sp. JS42, complete genomehelix-turn-helix domain protein9e-1372.4
NC_010602:2244729:228503322850332285434402Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein3e-0753.9
NC_010842:2250119:229041922904192290820402Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeTranscription regulator containing HTH domain3e-0753.9
NC_007406:3354000:336976133697613370135375Nitrobacter winogradskyi Nb-255, complete genometranscriptional regulator, XRE family4e-0753.1
NC_015633:2565753:258536125853612585627267Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein3e-0650.8