Pre_GI: BLASTP Hits

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Query: NC_007912:909112:922165 Saccharophagus degradans 2-40, complete genome

Start: 922165, End: 922410, Length: 246

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007509:3668:235972359723938342Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, XRE family1e-0961.6
NC_010120:1065833:107078010707801071133354Neisseria meningitidis 053442, complete genometranscriptional regulator1e-0961.6
NC_014311:1507945:151246115124611512742282Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator2e-0960.8
NC_010725:4035397:407959340795934079832240Methylobacterium populi BJ001, complete genometranscriptional regulator, XRE family4e-0857
NC_014311:3076519:311203031120303112257228Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein9e-0855.8
NC_016641:2894899:291399229139922914339348Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator1e-0755.5
NC_020260:440000:450272450272450733462Cronobacter sakazakii Sp291, complete genomeXRE family transcriptional regulator1e-0755.5
NC_018867:10238:195531955319765213Dehalobacter sp. CF chromosome, complete genomeRegulatory protein C.BcnI1e-0755.1
NC_014483:1146682:114946911494691149816348Paenibacillus polymyxa E681 chromosome, complete genomePutative HTH-type transcriptional regulator2e-0754.7
NC_016791:3953972:395870839587083958935228Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator2e-0754.7
NC_012912:1053618:106326310632631063553291Dickeya zeae Ech1591, complete genometranscriptional regulator, XRE family2e-0754.7
NC_012808:4137000:413802541380254138288264Methylobacterium extorquens AM1, complete genomehypothetical protein3e-0753.9
NC_006350:845513:873400873400873708309Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DNA-binding protein5e-0753.1
NC_010338:2136193:214120421412042141413210Caulobacter sp. K31, complete genometranscriptional regulator, XRE family7e-0752.8
NC_009659:1050532:111355311135531113789237Janthinobacterium sp. Marseille chromosome, complete genomesubunit S of type I restriction-modification system7e-0752.8
NC_008322:373531:373304373304373534231Shewanella sp. MR-7, complete genometranscriptional regulator, XRE family6e-0752.8
NC_013421:478586:490944490944491180237Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, XRE family2e-0650.8
NC_003047:536151:546632546632546901270Sinorhizobium meliloti 1021, complete genomeHYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN3e-0650.4
NC_009667:1934818:194392819439281944158231Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator3e-0650.4
NC_008686:95326:116687116687116923237Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, XRE family7e-0649.3
NC_014844:511552:515402515402515728327Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehelix-turn-helix domain-containing protein9e-0648.9