Pre_GI: BLASTP Hits

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Query: NC_007778:1053462:1068814 Rhodopseudomonas palustris HaA2, complete genome

Start: 1068814, End: 1070166, Length: 1353

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014834:3130715:3135616313561631369531338Rhodopseudomonas palustris DX-1 chromosome, complete genomeintegrase family protein1e-95350
NC_009937:1733196:1738179173817917395941416Azorhizobium caulinodans ORS 571, complete genomephage integrase7e-33142
NC_012988:769981:7742397742397755941356Methylobacterium extorquens DM4, complete genomephage integrase3e-30133
NC_010725:2589014:2603270260327026046401371Methylobacterium populi BJ001, complete genomeintegrase family protein8e-27122
NC_007298:2689731:2698059269805926993271269Dechloromonas aromatica RCB, complete genomePhage integrase1e-23111
NC_007626:3393940:3402977340297734043441368Magnetospirillum magneticum AMB-1, complete genomeIntegrase6e-22105
NC_011757:4293000:4317113431711343185071395Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein1e-21104
NC_007925:4060635:4074302407430240757141413Rhodopseudomonas palustris BisB18, complete genomephage integrase8e-21102
NC_011601:4856717:4861028486102848622391212Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase2e-1997.1
NC_016812:463000:4685214685214699241404Sinorhizobium fredii HH103, complete genometyrosine recombinase XerC7e-1892.4
NC_013361:313540:3324433324433337201278Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase3e-1790.1
NC_017150:853708:8619728619728635761605Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein2e-1584.3
NC_016803:593484:5983485983486000871740Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein5e-1582.4
NC_020908:2788852:2797829279782927990701242Octadecabacter arcticus 238, complete genomeputative integrase1e-1481.3
NC_013854:1686997:1697457169745716991721716Azospirillum sp. B510, complete genomephage integrase family protein3e-1480.1
NC_011283:4438500:4450876445087644520841209Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase3e-1480.1
NC_020260:440000:4553004553004564781179Cronobacter sakazakii Sp291, complete genomeputative integrase5e-1479.7
NC_007519:1782067:1787842178784217896921851Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein4e-1376.3
NC_020064:3825916:3832193383219338333921200Serratia marcescens FGI94, complete genomephage integrase family protein3e-1273.6
NC_020181:4800298:4819881481988148210831203Enterobacter aerogenes EA1509E, complete genomeputative integrase6e-1272.4
NC_014965:2200974:2204394220439422057281335Vibrio vulnificus MO6-24/O chromosome I, complete sequenceintegrase6e-1272.4
NC_014973:1941500:1955814195581419571001287Geobacter sp. M18 chromosome, complete genomeintegrase family protein1e-1068.6
NC_016818:859181:8751518751518763651215Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesite-specific recombinase XerD1e-1068.6
NC_014121:4299500:4311727431172743129771251Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative integrase1e-1067.8
NC_014153:2044500:2065464206546420667681305Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein2e-1067.4
NC_007643:791500:7959047959047970641161Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase3e-1067
NC_011146:1998981:2013194201319420144981305Geobacter bemidjiensis Bem, complete genomeintegrase family protein7e-1065.9
NC_007643:3799425:3824154382415438258541701Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase2e-0963.9
NC_010524:1005355:1017147101714710183131167Leptothrix cholodnii SP-6, complete genomeintegrase family protein7e-0962.4
NC_002939:1866651:1874575187457518762451671Geobacter sulfurreducens PCA, complete genomeintegrative genetic element Gsu5, integrase1e-0861.6
NC_004603:2235142:2240007224000722413441338Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein3e-0860.5
NC_012796:2683711:2690065269006526917561692Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase9e-0858.5
NC_015410:2258800:2276000227600022773761377Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase family protein1e-0758.5
NC_009952:2217877:2223872222387222254611590Dinoroseobacter shibae DFL 12, complete genomeputative integrase2e-0757.4
NC_011146:3426500:3474592347459234759021311Geobacter bemidjiensis Bem, complete genomeintegrase family protein2e-0757.4
NC_014117:132524:1736441736441747381095Burkholderia sp. CCGE1002 chromosome chromosome 1, completeintegrase family protein3e-0757
NC_010682:460523:4937344937344950531320Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein3e-0757
NC_008027:1847040:1862344186234418636361293Pseudomonas entomophila L48, complete genomeintegrase5e-0756.2
NC_013209:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-01, complete genomephage integrase5e-0756.2
NC_017100:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-03, complete genomephage integrase5e-0756.2
NC_017108:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-12, complete genomephage integrase5e-0756.2
NC_017111:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-32, complete genomephage integrase5e-0756.2
NC_017121:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-07, complete genomephage integrase5e-0756.2
NC_017125:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-22, complete genomephage integrase5e-0756.2
NC_017146:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-26, complete genomephage integrase5e-0756.2
NC_017150:160892:1860491860491874221374Acetobacter pasteurianus IFO 3283-01-42C, complete genomephage integrase5e-0756.2
NC_003911:1265972:1277271127727112788601590Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family8e-0755.5
NC_006350:845513:8574748574748588321359Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phage-related integrase2e-0654.3
NC_009076:779407:7927997927997941571359Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0654.3
NC_012796:2041579:2048611204861120503621752Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-0654.3
NC_008686:1180388:1189396118939611906041209Paracoccus denitrificans PD1222 chromosome 1, complete sequencephage integrase family protein2e-0654.3
NC_007434:1001514:1016158101615810173961239Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative phage-related integrase2e-0653.9
NC_010501:3987615:3992949399294939942741326Pseudomonas putida W619, complete genomeintegrase family protein3e-0653.9
NC_020409:584000:5846785846785863511674Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Phage integrase3e-0653.5