Pre_GI: BLASTP Hits

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Query: NC_007604:41495:67177 Synechococcus elongatus PCC 7942, complete genome

Start: 67177, End: 67986, Length: 810

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:1551939:155289715528971553706810Synechococcus elongatus PCC 6301, complete genomeABC-2 type transport system permease protein1e-74280
NC_019757:1789237:179440217944021795214813Cylindrospermum stagnale PCC 7417, complete genomeABC-type transport system involved in multi-copper enzyme maturation, permease component1e-1893.6