Pre_GI: BLASTP Hits

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Query: NC_007492:4310828:4330956 Pseudomonas fluorescens PfO-1, complete genome

Start: 4330956, End: 4333034, Length: 2079

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016147:1435000:1450226145022614524332208Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein0719
NC_013421:3279499:3277367327736732795022136Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative6e-158558
NC_014931:5088125:5088886508888650919303045Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF940 membrane lipoprotein5e-155548
NC_012917:1506083:1540537154053715426602124Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-153542
NC_012791:2052923:2077486207748620804582973Variovorax paradoxus S110 chromosome 1, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative2e-150533
NC_014394:1373602:1400546140054614041933648Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein7e-147521
NC_008570:3220539:3227224322722432292752052Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeYjbH6e-145514
NC_017047:3936624:3961790396179039638832094Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein9e-138491
NC_016818:3887000:3910763391076339128562094Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative lipoprotein1e-137491
NC_015061:3840463:3900115390011539022082094Rahnella sp. Y9602 chromosome, complete genomehypothetical protein1e-137490
NC_016602:103878:1455811455811478362256Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceWbfB-like protein2e-123443
NC_011663:1709003:1743937174393717463062370Shewanella baltica OS223 chromosome, complete genomehypothetical protein3e-121436
NC_008228:3841897:3845545384554538476742130Pseudoalteromonas atlantica T6c, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative2e-119430
NC_009654:866124:8661248661248683372214Marinomonas sp. MWYL1, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative6e-119428
NC_008321:1523323:1552740155274015551032364Shewanella sp. MR-4, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative1e-118427
NC_015633:461143:4589364589364611462211Vibrio anguillarum 775 chromosome chromosome I, complete sequenceWbfB1e-117424
NC_008322:1595500:1624150162415016265132364Shewanella sp. MR-7, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative2e-117423
NC_015497:1287877:1328279132827913304202142Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein1e-116421
NC_009783:649500:6674906674906696522163Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-115417
NC_008750:1659095:1675547167554716779132367Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF940, membrane lipoprotein putative6e-115415
NC_005085:786851:7966497966497995102862Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-39164