Pre_GI: BLASTP Hits

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Query: NC_007492:3655545:3679575 Pseudomonas fluorescens PfO-1, complete genome

Start: 3679575, End: 3680027, Length: 453

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:282565:320329320329320736408Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein9e-22102
NC_010511:6169468:617558361755836176020438Methylobacterium sp. 4-46 chromosome, complete genomecupin2e-1994.7
NC_008061:2548849:255146325514632551858396Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceCupin 2, conserved barrel1e-1892
NC_008543:2696377:271513027151302715525396Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceCupin 2, conserved barrel domain protein1e-1892
NC_002927:1292573:130428313042831304726444Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1891.3
NC_010515:1618093:162069916206991621103405Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceCupin 2 conserved barrel domain protein4e-1890.1
NC_016631:1757788:176671217667121767143432Granulicella mallensis MP5ACTX8 chromosome, complete genomecupin2e-1787.8
NC_009138:668000:674506674506675018513Herminiimonas arsenicoxydans, complete genomeConserved hypothetical protein; putative exported protein5e-1786.7
NC_009659:1050532:109879410987941099225432Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein6e-1786.3
NC_017249:263873:282283282283282702420Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1685.1
NC_008314:1559102:157321815732181573622405Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein2e-1684.7
NC_008825:3161146:316229431622943162695402Methylibium petroleiphilum PM1, complete genomehypothetical protein4e-1580.1
NC_004463:8401060:842478784247878425293507Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-1479
NC_014931:2511423:251498125149812515391411Variovorax paradoxus EPS chromosome, complete genomeCupin 2 conserved barrel domain protein2e-0961.2
NC_008313:1956500:195913119591311959532402Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical membrane associated protein6e-0959.7
NC_015724:339500:357550357550357822273Cupriavidus necator N-1 plasmid BB2p, complete sequencecupin 2 protein2e-0858.2
NC_008314:1202963:121281912128191213208390Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein7e-0856.2
NC_007492:2771021:279631327963132796738426Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF8616e-0856.2
NC_003910:2588000:260736126073612607759399Colwellia psychrerythraea 34H, complete genomehypothetical protein1e-0755.5
NC_007347:1596040:161086316108631611264402Ralstonia eutropha JMP134 chromosome 1, complete sequenceCupin:Protein of unknown function DUF8612e-0754.3
NC_015723:384000:404112404112404576465Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein9e-0752.4