Pre_GI: BLASTP Hits

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Query: NC_007492:3655545:3675082 Pseudomonas fluorescens PfO-1, complete genome

Start: 3675082, End: 3675633, Length: 552

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018691:3525430:353820935382093538730522Alcanivorax dieselolei B5 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-32138
NC_010510:339879:346474346474347019546Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1479.3
NC_009937:5033152:503490050349005035424525Azorhizobium caulinodans ORS 571, complete genomeFecI-like protein2e-1065.5
NC_002516:1474000:147472714747271475467741Pseudomonas aeruginosa PAO1, complete genomeprobable sigma-70 factor, ECF subfamily6e-1063.5
NC_016830:2168523:218617921861792186661483Pseudomonas fluorescens F113 chromosome, complete genomeprotein FpvI4e-0961.2
NC_018691:318662:319603319603320118516Alcanivorax dieselolei B5 chromosome, complete genomeRNA polymerase sigma-70 factor, ECF subfamily3e-0858.2
NC_021150:2546000:254610825461082546812705Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor, FecI family6e-0753.9
NC_012560:2546000:254609625460962546800705Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma factor, FecI family6e-0753.9
NC_015563:4093650:409834140983414098964624Delftia sp. Cs1-4 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor5e-0650.8
NC_015594:1210736:121573312157331216245513Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeECF subfamily RNA polymerase sigma-24 subunit5e-0650.8