Pre_GI: BLASTP Hits

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Query: NC_007492:3384077:3397383 Pseudomonas fluorescens PfO-1, complete genome

Start: 3397383, End: 3398582, Length: 1200

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:3733913:3750622375062237519141293Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transporter5e-73275
NC_015733:1793399:1816867181686718180211155Pseudomonas putida S16 chromosome, complete genomebenzoate transporter7e-68258
NC_010002:4073724:4075877407587740771331257Delftia acidovorans SPH-1, complete genomebenzoate transporter2e-66253
NC_014532:1481787:1501596150159615027891194Halomonas elongata DSM 2581, complete genomebenzoate transporter3e-65249
NC_007348:2115152:2126767212676721279841218Ralstonia eutropha JMP134 chromosome 2, complete sequenceBenzoate membrane transport protein2e-64246
NC_017187:1757934:1760315176031517615921278Arcobacter butzleri ED-1, complete genomebenzoate membrane transport protein3e-64246
NC_015556:2265940:2292702229270222939431242Pseudomonas fulva 12-X chromosome, complete genomebenzoate transporter3e-61236
NC_015567:2328782:2328782232878223299661185Serratia sp. AS9 chromosome, complete genomebenzoate transporter8e-57221
NC_015566:2328771:2328771232877123299551185Serratia sp. AS12 chromosome, complete genomebenzoate transporter8e-57221
NC_003919:5056650:5071593507159350727741182Xanthomonas axonopodis pv. citri str. 306, complete genomebenzoate transporter1e-53210
NC_007503:1111457:1130807113080711320601254Carboxydothermus hydrogenoformans Z-2901, complete genomeputative benzoate transporter1e-24114
NC_007298:2947200:2961056296105629623031248Dechloromonas aromatica RCB, complete genomeBenzoate membrane transport protein:Xanthine/uracil/vitamin C permease9e-24111
NC_015565:2027279:2041562204156220428331272Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completebenzoate transporter1e-22107
NC_014640:4193193:4202915420291542041201206Achromobacter xylosoxidans A8 chromosome, complete genomebenzoate membrane transporter 19e-21101
NC_009480:703102:7236407236407248751236Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative benzoate transport protein, BenE family1e-1997.8
NC_017506:1100679:1119879111987911211111233Marinobacter adhaerens HP15 chromosome, complete genomebenzoate membrane transport protein2e-1894
NC_015859:1147537:115076711507671151744978Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein2e-1687.4
NC_007777:3962000:3978391397839139799411551Frankia sp. CcI3, complete genomeBenzoate membrane transport protein4e-1169.3