Pre_GI: BLASTP Hits

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Query: NC_007492:3180480:3223055 Pseudomonas fluorescens PfO-1, complete genome

Start: 3223055, End: 3223909, Length: 855

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010511:871905:886292886292887188897Methylobacterium sp. 4-46 chromosome, complete genomeamidohydrolase 25e-50197
NC_009076:1566500:157881215788121579795984Burkholderia pseudomallei 1106a chromosome I, complete sequenceamidohydrolase family protein1e-48193
NC_006350:2427000:243005424300542431037984Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative hydrolase1e-48193
NC_007434:1923000:1945799194579919469051107Burkholderia pseudomallei 1710b chromosome I, complete sequencehydrolase1e-48193
NC_009074:1555500:156911215691121570086975Burkholderia pseudomallei 668 chromosome I, complete sequencehydrolase2e-48192
NC_007651:3064530:306586430658643066790927Burkholderia thailandensis E264 chromosome I, complete sequencehydrolase2e-46185
NC_011740:3739395:374593937459393746757819Escherichia fergusonii ATCC 35469, complete genomeputative hydrolase1e-44179
NC_009952:592000:596939596939597799861Dinoroseobacter shibae DFL 12, complete genomeamidohydrolase family protein1e-23110
NC_004129:4093610:409963040996304100520891Pseudomonas fluorescens Pf-5, complete genomeamidohydrolase2e-23109
NC_009512:1518113:153418715341871535050864Pseudomonas putida F1, complete genomeamidohydrolase 25e-2098.6
NC_004129:4093610:4101896410189641035061611Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, GntR family/amidohydrolase family protein2e-1996.7
NC_013209:1406793:142338814233881424269882Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator GntR5e-1995.1
NC_017100:1407804:142439914243991425280882Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator GntR5e-1995.1
NC_017108:1406787:142338214233821424263882Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator GntR5e-1995.1
NC_017111:1406787:142338214233821424263882Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator GntR5e-1995.1
NC_017121:1406787:142338214233821424263882Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator GntR5e-1995.1
NC_017125:1407804:142439914243991425280882Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator GntR5e-1995.1
NC_017146:1407804:142439914243991425280882Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator GntR5e-1995.1
NC_017150:1406793:142338814233881424269882Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator GntR5e-1995.1
NC_008061:2773670:277856527785652779497933Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceamidohydrolase 21e-1480.9
NC_008543:2474002:248751024875102488442933Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceamidohydrolase 21e-1480.9
NC_010515:1900967:190586219058621906794933Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceamidohydrolase 21e-1480.5
NC_011892:352652:362752362752363594843Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeamidohydrolase 22e-1480.1
NC_014539:743523:748293748293749216924Burkholderia sp. CCGE1003 chromosome 1, complete sequenceamidohydrolase 21e-1273.9
NC_015733:1976752:199438519943851995278894Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-1168.9
NC_015458:3390674:339681333968133397694882Pusillimonas sp. T7-7 chromosome, complete genomeamidohydrolase 25e-1168.6