Pre_GI: BLASTP Hits

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Query: NC_007356:51080:85242 Dehalococcoides sp. CBDB1, complete genome

Start: 85242, End: 85613, Length: 372

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015694:48344:516785167852076399Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequencehelix-turn-helix domain-containing protein4e-23106
NC_011666:2109274:212798321279832128378396Methylocella silvestris BL2, complete genometranscriptional regulator, XRE family3e-1890.5
NC_013552:207345:209969209969210367399Dehalococcoides sp. VS, complete genomehypothetical protein2e-1374.7
NC_016935:2069562:208239820823982083063666Paenibacillus mucilaginosus 3016 chromosome, complete genomeXRE family transcriptional regulator3e-1063.9
NC_014393:937000:939498939498939920423Clostridium cellulovorans 743B chromosome, complete genomehelix-turn-helix domain-containing protein2e-0961.2
NC_016047:3406488:340648834064883406907420Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein3e-0960.8
NC_013205:1123280:113253211325321133152621Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family2e-0960.8
NC_014479:3245126:324993332499333250340408Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscriptional repressor4e-0960.5
NC_013522:991649:100778510077851008114330Thermanaerovibrio acidaminovorans DSM 6589, complete genometranscriptional regulator, XRE family6e-0959.7
NC_016641:2950000:295057629505762951046471Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator7e-0959.3
NC_015690:1542061:155511215551121555504393Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXRE family transcriptional regulator2e-0857.8
NC_014479:3245126:325036932503693250788420Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative transcriptional repressor2e-0857.8
NC_014483:1179286:118168111816811182154474Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator2e-0857.4
NC_010612:957786:957786957786958202417Mycobacterium marinum M, complete genometranscriptional regulatory protein4e-0856.6
NC_013929:3299736:330737133073713307766396Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein7e-0855.8
NC_007644:280000:304622304622305062441Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family2e-0754.7
NC_010338:2136193:214301521430152143518504Caulobacter sp. K31, complete genometranscriptional regulator, XRE family3e-0753.9
NC_014624:1369642:137228713722871372838552Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0652
NC_015660:1076159:108793410879341088275342Geobacillus thermoglucosidasius C56-YS93 chromosome, completehelix-turn-helix domain-containing protein1e-0652
NC_008576:3307297:331297933129793313362384Magnetococcus sp. MC-1, complete genometranscriptional regulator, XRE family1e-0651.6
NC_016943:2391366:239702423970242397776753Blastococcus saxobsidens DD2, complete genomeputative transcriptional regulator9e-0648.9