Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1869321 Thermobifida fusca YX, complete genome

Start: 1869321, End: 1871582, Length: 2262

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016935:4233223:4259468425946842618882421Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein5e-25117
NC_015690:4469775:4505065450506545074852421Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein8e-25115
NC_016771:2933886:2936050293605029396313582Bacillus cereus NC7401, complete genomehypothetical protein1e-23112
NC_011658:2978000:2980173298017329837543582Bacillus cereus AH187 chromosome, complete genomealpha-fucosidase1e-23112
NC_015949:1957185:1957185195718519594432259Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomealpha-L-fucosidase5e-23110
NC_009614:3748950:3773482377348237759412460Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglycoside hydrolase1e-22108
NC_014655:2533929:2544272254427225466892418Leadbetterella byssophila DSM 17132 chromosome, complete genomealpha-l-fucosidase1e-21105
NC_020054:2066510:2083813208381320864372625Fibrella aestuarina BUZ 2 drat genomeAlpha-L-fucosidase1e-20102
NC_008536:4921224:4931457493145749337362280Solibacter usitatus Ellin6076, complete genomehypothetical protein9e-21102
NC_014817:142976:1556521556521580212370Asticcacaulis excentricus CB 48 chromosome 2, complete sequencealpha-l-fucosidase2e-20101
NC_014041:1084246:1087039108703910894982460Zunongwangia profunda SM-A87 chromosome, complete genomesix-hairpin glycosidase4e-1997.1
NC_016776:5114211:5129791512979151322802490Bacteroides fragilis 638R, complete genomehypothetical protein1e-1895.5
NC_003228:5027668:5043254504325450457432490Bacteroides fragilis NCTC 9343, complete genomehypothetical protein1e-1895.5
NC_006347:5094763:5110350511035051128392490Bacteroides fragilis YCH46, complete genomehypothetical protein1e-1895.5
NC_003366:2143173:2145801214580121502404440Clostridium perfringens str. 13, complete genomehypothetical protein2e-1791.3
NC_016582:11820671:118259611182596111826425465Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein5e-0963.9