Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1833672 Thermobifida fusca YX, complete genome

Start: 1833672, End: 1835321, Length: 1650

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015951:107360:1121481121481137581611Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein, Cse1 family1e-75284
NC_013159:1422370:1430835143083514322891455Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated protein, Cse1 family5e-64245
NC_008609:2518993:2530397253039725319171521Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein, Cse1 family1e-1378.2
NC_015387:942974:9539549539549554561503Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Cse1 family2e-1068.2
NC_017186:6395435:6448037644803764496171581Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated protein CSE13e-1067
NC_014318:6395392:6447993644799364495731581Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated protein CSE13e-1067
NC_016109:603829:6185766185766202881713Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein6e-0756.2
NC_018720:1812000:1819002181900218207591758Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein, Cse1 family8e-0652.4