Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1799277 Thermobifida fusca YX, complete genome

Start: 1799277, End: 1799687, Length: 411

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:517878:553966553966554343378Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF4883e-32137
NC_007650:420745:437267437267437638372Burkholderia thailandensis E264 chromosome II, complete sequenceProtein of unknown function, DUF488 superfamily3e-30130
NC_014315:1042556:105699010569901057355366Nitrosococcus watsoni C-113 chromosome, complete genomehypothetical protein4e-27120
NC_007484:2392739:239962323996232399985363Nitrosococcus oceani ATCC 19707, complete genomeProtein of unknown function DUF4887e-27119
NC_011146:2614500:262873426287342629084351Geobacter bemidjiensis Bem, complete genomeprotein of unknown function DUF4885e-26116
NC_004369:868890:872286872286872645360Corynebacterium efficiens YS-314, complete genomehypothetical protein7e-26115
NC_006958:828089:848105848105848458354Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE UROPORPHYRIN-III C-METHYLTRANSFERASE4e-24109
NC_012918:2277500:228022522802252280578354Geobacter sp. M21 chromosome, complete genomehypothetical protein9e-24108
NC_010830:867532:886540886540886944405Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein9e-23105
NC_013173:1305916:131790013179001318250351Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF4886e-23105
NC_010162:10962500:109645981096459810965122525Sorangium cellulosum 'So ce 56', complete genomehypothetical protein1e-22104
NC_009659:1050532:110143711014371101823387Janthinobacterium sp. Marseille chromosome, complete genomeuroporphyrin-III C-methyltransferase4e-21100
NC_009138:668000:677149677149677535387Herminiimonas arsenicoxydans, complete genomehypothetical protein4e-21100
NC_013665:849508:908926908926909282357Methanocella paludicola SANAE, complete genomehypothetical protein5e-2199.8
NC_015978:113656:132617132617133027411Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeprotein YeaO2e-2097.8
NC_014217:1352777:135976513597651360139375Starkeya novella DSM 506 chromosome, complete genomeprotein of unknown function DUF4885e-2096.3
NC_018720:1468397:146933414693341469702369Bifidobacterium asteroides PRL2011 chromosome, complete genomeputative transcriptional regulator, MarR family5e-2096.3
NC_008699:4922465:492435249243524924687336Nocardioides sp. JS614, complete genomeprotein of unknown function DUF4888e-2095.5
NC_019897:1224798:125880012588001259195396Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-1994
NC_014011:1354261:135794313579431358299357Aminobacterium colombiense DSM 12261 chromosome, complete genomeprotein of unknown function DUF4885e-1992.8
NC_002754:1661000:168295516829551683302348Sulfolobus solfataricus P2, complete genomehypothetical protein1e-1892
NC_015850:1947000:198279819827981983259462Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein2e-1890.9
NC_011883:2680380:268302626830262683379354Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,protein of unknown function DUF4883e-1787
NC_015733:3923800:394066139406613941047387Pseudomonas putida S16 chromosome, complete genomehypothetical protein6e-1786.3
NC_008800:2695977:270523627052362705613378Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein7e-1785.9
NC_017343:224777:244813244813245169357Staphylococcus aureus subsp. aureus ECT-R 2, complete genomehypothetical protein8e-1785.5
NC_015224:2701914:271210827121082712461354Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-1684.3
NC_013850:3303500:330745833074583307814357Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF4889e-1682
NC_013526:530212:543063543063543407345Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeprotein of unknown function DUF4881e-1582
NC_014121:2514544:253530925353092535653345Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-1374.7
NC_010545:83353:102640102640103101462Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein5e-1373.2
NC_007164:62816:775667756677949384Corynebacterium jeikeium K411, complete genomehypothetical protein4e-1167
NC_013131:9711508:972248497224849722846363Catenulispora acidiphila DSM 44928, complete genomeprotein of unknown function DUF4883e-1063.9