Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1759226 Thermobifida fusca YX, complete genome

Start: 1759226, End: 1762753, Length: 3528

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014210:2597000:2606406260640626100023597Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,RecB family nuclease, putative0748
NC_018524:4848154:4878663487866348821393477Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomerecB nuclease, TM0106 family domain protein0706
NC_009142:5579563:5606741560674156100973357Saccharopolyspora erythraea NRRL 2338, complete genomeATPase0642
NC_008595:1349579:1351464135146413548773414Mycobacterium avium 104, complete genomeATPase4e-91337
NC_013174:2624365:2633455263345526371983744Jonesia denitrificans DSM 20603, complete genomehypothetical protein2e-77291
NC_008726:1175999:1175999117599911793643366Mycobacterium vanbaalenii PYR-1, complete genomeconserved hypothetical protein7e-54213
NC_012803:2195808:2195808219580821993983591Micrococcus luteus NCTC 2665, complete genomepredicted nuclease (RecB family)1e-48195
NC_010943:2499092:2515987251598725193943408Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-47192
NC_016943:3352413:3352413335241333556733261Blastococcus saxobsidens DD2, complete genomehypothetical protein6e-46187
NC_015576:612164:6546246546246578333210Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein3e-45184
NC_011901:1860887:1899181189918119025373357Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein4e-44181
NC_007969:1095438:1106535110653511100533519Psychrobacter cryohalolentis K5, complete genomehypothetical protein6e-43177
NC_013222:615948:6245196245196278783360Robiginitalea biformata HTCC2501, complete genomehypothetical protein8e-39163