Pre_GI: BLASTP Hits

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Query: NC_007333:1559321:1577211 Thermobifida fusca YX, complete genome

Start: 1577211, End: 1578431, Length: 1221

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:3141196:3141196314119631424191224Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein6e-119427
NC_018681:5627940:5645300564530056465261227Nocardia brasiliensis ATCC 700358 chromosome, complete genomehelix-turn-helix domain-containing protein5e-54211
NC_021177:3867439:3876476387647638777261251Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator, XRE family2e-46187
NC_015434:1885373:1899943189994319009891047Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein7e-42171
NC_014318:6539137:6550876655087665521111236Amycolatopsis mediterranei U32 chromosome, complete genomeXRE family transcriptional regulator2e-23110
NC_017186:6539181:6550920655092065521551236Amycolatopsis mediterranei S699 chromosome, complete genomeXRE family transcriptional regulator2e-23110
NC_013131:9903320:9922317992231799235491233Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, XRE family1e-23110
NC_009953:2808288:2821875282187528234491575Salinispora arenicola CNS-205 chromosome, complete genomeXRE family transcriptional regulator6e-23108
NC_015953:3227000:3239336323933632405561221Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator2e-22107
NC_013929:2375613:2438775243877524400071233Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein2e-22107
NC_014666:1601972:1610862161086216120761215Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein5e-22105
NC_015656:3300747:3311639331163933128621224Frankia symbiont of Datisca glomerata chromosome, complete genomehelix-turn-helix domain-containing protein1e-21104
NC_016111:2402891:2408521240852124098251305Streptomyces cattleya NRRL 8057, complete genomeHelix-turn-helix protein1e-21104
NC_014391:1226922:1246737124673712479511215Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehelix-turn-helix domain-containing protein2e-21103
NC_014318:7480669:7489889748988974910881200Amycolatopsis mediterranei U32 chromosome, complete genomeXRE family transcriptional regulator2e-20100
NC_007333:3244572:3257242325724232584471206Thermobifida fusca YX, complete genomehelix-turn-helix motif3e-20100
NC_017186:7480714:7489934748993474910971164Amycolatopsis mediterranei S699 chromosome, complete genomeXRE family transcriptional regulator3e-1996.7
NC_013510:747042:7561257561257572761152Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family4e-1789.4
NC_016111:3659269:3669939366993936711471209Streptomyces cattleya NRRL 8057, complete genomehypothetical protein8e-1788.6
NC_019673:7400817:7404248740424874056121365Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-1685.9
NC_013510:4960500:4969443496944349706451203Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family5e-1685.9
NC_009142:1242850:1259909125990912611081200Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator, XRE family7e-1685.5
NC_014211:439611:4479764479764493881413Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidhypothetical protein3e-1583.6
NC_016109:785819:7985657985657997881224Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator5e-1582.4
NC_013510:2432879:2440113244011324411651053Thermomonospora curvata DSM 43183, complete genomehypothetical protein6e-1582.4
NC_016582:7101701:7113309711330971145141206Streptomyces bingchenggensis BCW-1 chromosome, complete genomeXRE family transcriptional regulator5e-1479.3
NC_009953:4240000:4248483424848342496911209Salinispora arenicola CNS-205 chromosome, complete genomeXRE family transcriptional regulator7e-1478.6
NC_017093:1411532:1412458141245814136841227Actinoplanes missouriensis 431, complete genomeputative transcriptional regulator8e-1375.1
NC_013595:9651019:9664128966412896653721245Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, XRE family1e-1171.2
NC_016887:5607272:562009656200965620581486Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein2e-1170.9
NC_009953:3224412:3231740323174032330771338Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein3e-1170.1
NC_015434:1313979:1328968132896813303051338Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein2e-1067
NC_015953:3456535:3480274348027434815031230Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator4e-1066.2
NC_016111:613729:6282016282016294151215Streptomyces cattleya NRRL 8057, complete genomeTlmR22e-0964.3
NC_015434:4166755:4174279417427941754841206Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0859.3
NC_013729:3573000:3584197358419735853901194Kribbella flavida DSM 17836, complete genometranscriptional regulator, XRE family1e-0758.2
NC_007777:4954306:4959583495958349607941212Frankia sp. CcI3, complete genometranscriptional regulator, XRE family1e-0758.2
NC_015957:3067919:3083422308342230846511230Streptomyces violaceusniger Tu 4113 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0757
NC_021177:4258102:4265342426534242665261185Streptomyces fulvissimus DSM 40593, complete genomeHelix-turn-helix domain protein2e-0653.9
NC_014165:3559305:3568184356818435694041221Thermobispora bispora DSM 43833 chromosome, complete genomeXRE family transcriptional regulator3e-0653.5