Pre_GI: BLASTP Hits

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Query: NC_007333:1129826:1136729 Thermobifida fusca YX, complete genome

Start: 1136729, End: 1137427, Length: 699

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014210:3817948:383740838374083838103696Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,NADPH-dependent F420 reductase1e-78292
NC_008578:1827605:185045918504591851148690Acidothermus cellulolyticus 11B, complete genomeNADPH-dependent F420 reductase5e-38157
NC_008699:857837:860976860976861665690Nocardioides sp. JS614, complete genomeNADPH-dependent F420 reductase5e-37154
NC_007681:770267:776161776161776841681Methanosphaera stadtmanae DSM 3091, complete genomeF420H2:NADP oxidoreductase1e-29129
NC_015216:584841:597379597379598047669Methanobacterium sp. AL-21 chromosome, complete genomeNADPH-dependent F420 reductase1e-28126
NC_009637:774358:775186775186775857672Methanococcus maripaludis C7 chromosome, complete genomeNADPH-dependent F420 reductase2e-28125
NC_015636:966000:984159984159984833675Methanothermococcus okinawensis IH1 chromosome, complete genomeNADPH-dependent F420 reductase8e-28124
NC_000916:191561:192458192458193156699Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein5e-28124
NC_009634:887205:888075888075888746672Methanococcus vannielii SB chromosome, complete genomeNADPH-dependent F420 reductase4e-28124
NC_015562:1189111:122836112283611229026666Methanotorris igneus Kol 5 chromosome, complete genomeNADPH-dependent F420 reductase9e-28123
NC_014122:842560:850942850942851610669Methanocaldococcus infernus ME chromosome, complete genomeNADPH-dependent F420 reductase9e-28123
NC_009975:1034144:105459310545931055264672Methanococcus maripaludis C6, complete genomeNADPH-dependent F420 reductase3e-27121
NC_015593:2271097:228529422852942285953660Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeNADPH-dependent F420 reductase1e-25116
NC_003910:4234000:425411042541104254787678Colwellia psychrerythraea 34H, complete genomeNADPH-dependent F420 reductase1e-22106
NC_015957:5082172:509032850903285091104777Streptomyces violaceusniger Tu 4113 chromosome, complete genomeNADPH-dependent F420 reductase9e-1890.5
NC_009921:4186000:419049341904934191161669Frankia sp. EAN1pec, complete genomeNADP oxidoreductase coenzyme F420-dependent1e-1066.6
NC_014840:205723:240330240330241022693Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceNADP oxidoreductase coenzyme F420-dependent2e-1066.2
NC_014973:1257625:126404212640421264680639Geobacter sp. M18 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent6e-1064.7
NC_012988:769981:776754776754777404651Methylobacterium extorquens DM4, complete genomedinucleotide-binding enzyme oxidoreductase protein8e-1063.9
NC_009664:4347718:435445943544594355031573Kineococcus radiotolerans SRS30216, complete genomeNADP oxidoreductase coenzyme F420-dependent3e-0858.9
NC_015566:3417951:343191734319173432552636Serratia sp. AS12 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent4e-0858.5
NC_002488:1638946:165562516556251656353729Xylella fastidiosa 9a5c, complete genomehypothetical protein3e-0858.5
NC_015566:3417951:343376434337643434384621Serratia sp. AS12 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent8e-0857.4
NC_015379:2482901:248386324838632484555693Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase1e-0756.6
NC_015312:3290887:329741132974113298091681Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent3e-0755.8
NC_015379:2505233:254436425443642545038675Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase3e-0755.5
NC_017986:5797044:582408258240825824711630Pseudomonas putida ND6 chromosome, complete genomeNADP oxidoreductase, coenzyme F420-dependent1e-0653.1
NC_008278:613329:631207631207631884678Frankia alni ACN14a, complete genomeputative transmembrane oxidoreductase3e-0652