Pre_GI: BLASTP Hits

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Query: NC_006905:4638707:4651600 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4651600, End: 4651851, Length: 252

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:4728916472891647301751260Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-44177
NC_013941:3300000:3326760332676033279921233Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1684.7
NC_009792:3245368:3278160327816032793921233Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1580.9
NC_012917:1840172:1861399186139918627331335Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRelaxase/mobilization nuclease family protein1e-1271.6
NC_011283:4438500:4456389445638944576661278Klebsiella pneumoniae 342 chromosome, complete genomerelaxase/mobilization nuclease domain protein5e-1269.7