Pre_GI: BLASTP Hits

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Query: NC_006905:4638707:4648993 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4648993, End: 4649364, Length: 372

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:4716000:472583247258324726707876Salmonella enterica subsp. enterica serovar Paratyphi C strainreplication protein2e-63240
NC_007275:1:30430416171314Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeReplicase family family1e-1271.6
NC_012796:3600630:3651169365116936524311263Desulfovibrio magneticus RS-1, complete genomeputative rep protein3e-0857
NC_012968:239476:261008261008261964957Methylotenera mobilis JLW8, complete genomeplasmid replicase3e-0650.8