Pre_GI: BLASTP Hits

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Query: NC_006905:4405301:4444994 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4444994, End: 4445404, Length: 411

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:3310336:331101833110183311533516Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-55213
NC_011094:4361238:440083344008334401348516Salmonella enterica subsp. enterica serovar Schwarzengrund strLrgA family protein6e-55212
NC_016612:1790256:179284317928431793253411Klebsiella oxytoca KCTC 1686 chromosome, complete genomeLrgA family protein1e-43174
NC_020181:3585898:359852035985203598930411Enterobacter aerogenes EA1509E, complete genomeHolin-like protein CidA7e-40162
NC_008577:1015419:103111210311121031546435Shewanella sp. ANA-3 chromosome 1, complete sequenceLrgA family protein1e-0652