Pre_GI: BLASTP Hits

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Query: NC_006905:3780000:3785492 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3785492, End: 3786202, Length: 711

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008258:3581583:360124036012403602070831Shigella flexneri 5 str. 8401, complete genomehypothetical protein4e-112404
NC_004337:3590323:368939936893993690229831Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-112404
NC_011601:3951324:397221639722163972926711Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-112404
NC_012214:3931824:395367239536723954388717Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein yiaF2e-68258
NC_015224:4473230:447629644762964477015720Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein7e-50197