Pre_GI: BLASTP Hits

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Query: NC_006905:2630000:2638506 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2638506, End: 2638697, Length: 192

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:2806392:281056728105672810758192Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-24112
NC_004741:2593012:259687325968732597064192Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-24112
NC_011283:1307173:132399913239991324190192Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-21101
NC_020181:5384015:540140954014095401600192Enterobacter aerogenes EA1509E, complete genomePutative inner membrane protein4e-2096.7
NC_020063:1194000:120715312071531207326174Enterobacteriaceae bacterium strain FGI 57, complete genomeProtein of unknown function (DUF2633)1e-1891.7