Pre_GI: BLASTP Hits

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Query: NC_006905:2235607:2255634 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2255634, End: 2255969, Length: 336

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1632150:163722516372251637578354Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-37153
NC_011147:792489:797584797584797919336Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-34142
NC_006511:792543:797638797638797973336Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-34142
NC_011149:2179592:219870321987032199038336Salmonella enterica subsp. enterica serovar Agona str. SL483,putative inner membrane protein6e-33139
NC_016832:799764:804859804859805194336Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-33139
NC_004631:799810:804905804905805240336Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-33139
NC_003198:2179688:219869621986962199031336Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-33139