Pre_GI: BLASTP Hits

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Query: NC_006905:2235607:2245567 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2245567, End: 2245956, Length: 390

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:4707712:471509647150964715557462Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-26118
CP002185:3964500:397116839711683971629462Escherichia coli W, complete genomeconserved protein1e-26118
CP002516:119935:134444134444134905462Escherichia coli KO11, complete genomehypothetical protein1e-26118
NC_016902:119935:134444134444134905462Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-26118
NC_011748:4131924:414007341400734140534462Escherichia coli 55989, complete genomehypothetical protein1e-26118
CU928145:4131924:414007341400734140534462Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-26118
NC_011415:4006500:401323740132374013698462Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-26118
AP010958:4707712:471509647150964715557462Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein1e-26118
NC_012947:126596:141105141105141566462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-26118
NC_012967:3696877:370287137028713703332462Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-26118
NC_012759:3648500:365452636545263654987462Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-25114
NC_010468:111504:126187126187126648462Escherichia coli ATCC 8739, complete genomehypothetical protein5e-25113
NC_006905:2235607:224788122478812248246366Salmonella enterica subsp. enterica serovar Choleraesuis strHypothetical protein yibG precursor2e-22103
NC_012125:1632150:164496416449641645329366Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-22103
NC_011741:256932:267087267087267557471Escherichia coli IAI1 chromosome, complete genomehypothetical protein8e-0649.3
CU928160:256932:267087267087267557471Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative exported protein8e-0649.3