Pre_GI: BLASTP Hits

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Query: NC_006905:2175361:2182207 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2182207, End: 2183733, Length: 1527

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1693774:1709480170948017110061527Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein0879
NC_010556:2581464:2604109260410926056441536Exiguobacterium sibiricum 255-15, complete genomepolysaccharide biosynthesis protein3e-41169
NC_009615:1849237:1858946185894618604931548Parabacteroides distasonis ATCC 8503 chromosome, complete genomeflippase8e-37155
NC_004567:1089231:1098097109809710996471551Lactobacillus plantarum WCFS1, complete genomerepeat unit transporter1e-29131
NC_003366:613798:6274086274086289281521Clostridium perfringens str. 13, complete genomeprobable flippase6e-27122
NC_012984:1074721:1097751109775110993041554Lactobacillus plantarum JDM1, complete genometransporter4e-26119
NC_014033:1633493:1645935164593516474851551Prevotella ruminicola 23 chromosome, complete genomemultidrug/oligosaccharidyl-lipid/polysaccharide (MOP) flippase superfamily transporter2e-25117
NC_019968:891904:9179429179429194861545Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein6e-25115
NC_010610:107500:1187581187581202661509Lactobacillus fermentum IFO 3956, complete genomeputative flippase2e-23110
NC_015152:272500:2979922979922994941503Spirochaeta sp. Buddy chromosome, complete genomepolysaccharide biosynthesis protein8e-22105
NC_012984:1074721:1092711109271110942491539Lactobacillus plantarum JDM1, complete genometransporter9e-22105
NC_015577:3113907:3129874312987431314031530Treponema azotonutricium ZAS-9 chromosome, complete genomeEpsT3e-21103
NC_015420:35384:3709937099386311533Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completetransporter4e-20100
NC_017068:1788235:1799725179972518012601536Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein6e-1789.4
NC_018867:1161648:1183802118380211853311530Dehalobacter sp. CF chromosome, complete genomepolysaccharide transport protein, putative6e-1169.3
NC_014825:165701:1758111758111773131503Ruminococcus albus 7 plasmid pRUMAL02, complete sequencehypothetical protein3e-0653.9