Pre_GI: BLASTP Hits

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Query: NC_006856:26438:45648 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 45648, End: 46256, Length: 609

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:4992500:499255449925544993168615Escherichia coli UMN026 chromosome, complete genomeprotein TnpM, transposon Tn212e-115414
NC_017328:1075535:111211011121101112694585Shigella flexneri 2002017 chromosome, complete genomeUrf2 protein3e-110397
NC_016860:4055117:407224240722424072826585Salmonella enterica subsp. enterica serovar Typhimurium strtransposition modulator TnpM3e-110397
NC_009349:78000:965829658297166585Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetransposition modulator TnpM3e-110397
NC_010611:240839:249114249114249566453Acinetobacter baumannii ACICU, complete genomeTnpM8e-84309
NC_017171:1331794:134164013416401342092453Acinetobacter baumannii MDR-ZJ06 chromosome, complete genometransposon Tn21 modulator protein8e-84309
NC_017387:247462:263741263741264193453Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposase8e-84309
NC_017387:247462:274413274413274865453Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposase8e-84309
NC_009140:121107:143008143008143997990Salmonella enterica enterica sv Newport str. SL254, completeEAL domain-containing protein Urf23e-47187
NC_015733:5909821:592923959292395930228990Pseudomonas putida S16 chromosome, complete genomediguanylate phosphodiesterase3e-45181
NC_010501:2609567:260956726095672610556990Pseudomonas putida W619, complete genomediguanylate phosphodiesterase3e-45181
NC_008463:1293079:130710113071011308090990Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-45181
NC_015740:1291739:129428512942851295274990Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-45181
NC_009838:81913:951939519395516324Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencetransposition modulator protein1e-42172
NC_009656:115390:1153901153901163911002Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-42171
NC_004757:905417:915038915038916024987Nitrosomonas europaea ATCC 19718, complete genomeDomain of unknown function 26e-41167
NC_003384:109036:118573118573118785213Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidhypothetical protein1e-2099.8
NC_008344:1364142:137360313736031373815213Nitrosomonas eutropha C91, complete genomehypothetical protein1e-2099.8
NC_008341:29038:405304053040742213Nitrosomonas eutropha C91 plasmid1, complete sequencehypothetical protein1e-2099.8
NC_008573:195317:232761232761232973213Shewanella sp. ANA-3 plasmid 1, complete sequencehypothetical protein1e-2099.8
NC_015587:114684:1290741290741304711398Hydrogenobaculum sp. SHO chromosome, complete genomediguanylate cyclase/phosphodiesterase9e-0960.1
NC_020411:114683:1290731290731304701398Hydrogenobaculum sp. HO, complete genomediguanylate cyclase/phosphodiesterase9e-0960.1
NC_015557:114648:1290741290741304351362Hydrogenobaculum sp. 3684 chromosome, complete genomediguanylate cyclase/phosphodiesterase9e-0960.1
NC_009922:2721343:2738955273895527404691515Alkaliphilus oremlandii OhILAs, complete genomediguanylate cyclase/phosphodiesterase4e-0857.8
NC_020829:940692:9406929406929448764185Pseudomonas denitrificans ATCC 13867, complete genomemotility regulator1e-0756.6
NC_017068:2786391:2787022278702227887101689Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative response regulator receiver protein2e-0755.5
NC_010995:1459831:1474498147449814768162319Cellvibrio japonicus Ueda107, complete genomesensory box/GGDEF family protein7e-0753.9
NC_014624:2297000:2321790232179023240062217Eubacterium limosum KIST612 chromosome, complete genomeputative signaling protein8e-0753.5
NC_020209:4549563:4569765456976545714291665Pseudomonas poae RE*1-1-14, complete genomeputative EAL/GGDEF domain-containing protein9e-0753.5
NC_014121:3553809:3574450357445035760061557Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein9e-0753.5
NC_016112:562570:5625705625705642971728Methylomicrobium alcaliphilum chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase2e-0652.4
NC_014624:551510:5826665826665844351770Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-0652.4
NC_014973:3151701:3154188315418831565092322Geobacter sp. M18 chromosome, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase2e-0652