Pre_GI: BLASTP Hits

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Query: NC_006856:26438:42977 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 42977, End: 43585, Length: 609

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014394:3036758:306766830676683068282615Gallionella capsiferriformans ES-2 chromosome, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014901e-22106
NC_008390:2448379:245191424519142452597684Burkholderia cepacia AMMD chromosome 1, complete sequenceHAD-superfamily subfamily IB hydrolase, TIGR014903e-1995.1
NC_007484:2222474:223360222336022234231630Nitrosococcus oceani ATCC 19707, complete genomeHAD-superfamily hydrolase subfamily IB, PSPase-like3e-1891.7
NC_009256:2509806:251094025109402511560621Burkholderia vietnamiensis G4 chromosome 1, complete sequenceHAD family hydrolase8e-1890.1
NC_011768:3854455:385588038558803856542663Desulfatibacillum alkenivorans AK-01, complete genomeHAD-superfamily subfamily IB hydrolase, TIGR014902e-1168.9
NC_015501:1200411:120309612030961203611516Porphyromonas asaccharolytica DSM 20707 chromosome, completeHAD-superfamily subfamily IB hydrolase, TIGR014903e-1065.1
NC_012660:5242392:525551052555105256166657Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein7e-1063.9
NC_002163:1354215:137205613720561372691636Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein2e-0858.9