Pre_GI: BLASTP Hits

Some Help

Query: NC_006512:728281:741253 Idiomarina loihiensis L2TR, complete genome

Start: 741253, End: 742308, Length: 1056

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008609:1976403:199746219974621998448987Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, Fis family1e-42174
NC_012691:2476223:249222524922252493220996Tolumonas auensis DSM 9187, complete genomefilamentation induced by cAMP protein Fic2e-36153
NC_015737:1976000:198475419847541985743990Clostridium sp. SY8519, complete genomehypothetical protein2e-34146
NC_014363:232385:264471264471265427957Olsenella uli DSM 7084 chromosome, complete genomefilamentation induced by cAMP protein Fic1e-33144
NC_016610:2489415:249863124986312499629999Tannerella forsythia ATCC 43037 chromosome, complete genomeFic family protein1e-32140
NC_008554:4699577:4715718471571847167221005Syntrophobacter fumaroxidans MPOB, complete genomefilamentation induced by cAMP protein Fic9e-32137
NC_015424:3520783:3554555355455535555831029Aeromonas veronii B565 chromosome, complete genomeFilamentation induced by cAMP protein Fic2e-31136
NC_008463:2467219:247927924792792480274996Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-29130
NC_010729:619664:6460476460476471051059Porphyromonas gingivalis ATCC 33277, complete genomeputative Fic family protein4e-24112
NC_015436:202384:2114742114742125051032Spirochaeta coccoides DSM 17374 chromosome, complete genomefilamentation induced by cAMP protein Fic2e-23109
NC_008571:938835:965774965774966724951Gramella forsetii KT0803, complete genomefilamentation induced by cAMP (Fic) family prote in2e-1790.5
NC_014934:765892:7845307845307855341005Cellulophaga algicola DSM 14237 chromosome, complete genomefilamentation induced by camp protein fic9e-1788.2
NC_008942:875060:902927902927903913987Methanocorpusculum labreanum Z, complete genomehypothetical protein3e-1066.2
NC_002939:173833:1838831838831850491167Geobacter sulfurreducens PCA, complete genomeFic family protein7e-0858.5
NC_014921:830334:8303348303348313801047Mycoplasma fermentans M64 chromosome, complete genomefilamentation induced by camp protein fic5e-0755.8
NC_018721:943801:958331958331958495165Psychroflexus torquis ATCC 700755 chromosome, complete genome8e-0651.6