Pre_GI: BLASTP Hits

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Query: NC_006511:792543:804157 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 804157, End: 804696, Length: 540

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:2179592:219196121919612192497537Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-94342
NC_003198:2179688:219179321917932192488696Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-91335
NC_004631:799810:811448811448812143696Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-91335
NC_016832:799764:811405811405812097693Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-91334
NC_011147:792489:804160804160804642483Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-89327