Pre_GI: BLASTP Hits

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Query: NC_006511:2467763:2471256 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 2471256, End: 2471411, Length: 156

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2581145:258463725846372584792156Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-2097.4
NC_003198:378844:393222393222393377156Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-2097.4
NC_004631:2584244:258773625877362587891156Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-2097.4
NC_011149:361765:384437384437384550114Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-1272
NC_011083:403022:448767448767448880114Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1167.4