Pre_GI: BLASTP Hits

Some Help

Query: NC_006396:2025500:2030445 Haloarcula marismortui ATCC 43049 chromosome I, complete sequence

Start: 2030445, End: 2030855, Length: 411

Host Lineage: Haloarcula marismortui; Haloarcula; Halobacteriaceae; Halobacteriales; Euryarchaeota; Archaea

General Information: This organism was isolated from the Dead Sea and will provide information on the proteins necessary for adaptation to a high salt environment. Halophilic archaeon. Halobacterial species are obligately halophilic microorganisms that have adapted to optimal growth under conditions of extremely high salinity 10 times that of sea water. They contain a correspondingly high concentration of salts internally and exhibit a variety of unusual and unique molecular characteristics. Since their discovery, extreme halophiles have been studied extensively by chemists, biochemists, microbiologists, and molecular biologists to define both molecular diversity and universal features of life. A notable list of early research milestones on halophiles includes the discovery of a cell envelope composed of an S-layer glycoprotein, archaeol ether lipids and purple membrane, and metabolic and biosynthetic processes operating at saturating salinities. These early discoveries established the value of investigations directed at extremophiles and set the stage for pioneering phylogenetic studies leading to the three-domain view of life and classification of Halobacterium as a member of the archaeal domain. This organism is also know as "Halobacterium of the Dead Sea". Growth occurs in 1.7-5.1 M NaCl with optimum salt concentration of 3.4-3.9 M NaCl. The cytosol of this organism is a supersaturated salt solution in which proteins are soluble and active. This halophile is chemoorganotrophic and able to use a wide variety of compounds as sole carbon and energy sources.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008212:2978786:299626729962672996806540Haloquadratum walsbyi DSM 16790, complete genometranscription regulator; probably nickel responsive regulator5e-25112
NC_000909:467607:485578485578486003426Methanocaldococcus jannaschii DSM 2661, complete genomenickel responsive regulator6e-25112
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family2e-24110
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)4e-22103
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator2e-21100
NC_015416:2113949:213483821348382135245408Methanosaeta concilii GP-6 chromosome, complete genomeCopG family transcriptional regulator5e-2199.8
NC_007355:2838952:285914428591442859569426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetranscriptional regulator, CopG family2e-1890.9
NC_003552:2133590:215101021510102151447438Methanosarcina acetivorans C2A, complete genometranscriptional regulator, CopG family3e-1890.5
NC_011146:4070000:407565140756514076070420Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator, CopG family2e-1478.2
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain9e-1475.5
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator7e-1372.4
NC_013964:161105:169317169317169745429Haloferax volcanii DS2 plasmid pHV3, complete sequenceRibbon-helix-helix protein, copG family domain protein4e-1270.1
NC_020388:1582817:158544315854431585907465Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator6e-1269.3
NC_019974:2421422:243945524394552439892438Natronococcus occultus SP4, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain4e-1166.6
NC_013508:275081:292753292753293199447Edwardsiella tarda EIB202, complete genomenickel responsive regulator6e-1166.2
NC_006396:1097000:110280211028021103221420Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative nickel responsive regulator1e-1065.5
NC_020388:1582817:159309715930971593525429Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator1e-1065.5
NC_012779:261438:275788275788276225438Edwardsiella ictaluri 93-146, complete genomenickel-responsive transcriptional regulator NikR, putative3e-1063.9
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family5e-1063.2
NC_013959:83992:101591101591102100510Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator NikR, CopG family9e-1062.4
NC_004917:340997:341634341634342065432Helicobacter hepaticus ATCC 51449, complete genomenickel responsive regulator1e-0962
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family1e-0858.5
NC_020388:1428042:143786614378661438255390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator1e-0755.1
NC_016070:167362:187502187502187894393Thermoproteus tenax Kra 1, complete genomeCopG/MetJ family transcriptional regulator7e-0752.8
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain8e-0752.4
NC_020388:1582817:158833215883321588721390Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator2e-0651.6
NC_008701:168662:184589184589184987399Pyrobaculum islandicum DSM 4184, complete genomeputative transcriptional regulator, CopG family2e-0651.2