Pre_GI: BLASTP Hits

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Query: NC_006361:4521820:4543613 Nocardia farcinica IFM 10152, complete genome

Start: 4543613, End: 4544401, Length: 789

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008146:1748026:175501517550151755452438Mycobacterium sp. MCS, complete genomePAS fold-38e-24110
NC_008705:1752180:175916917591691759606438Mycobacterium sp. KMS, complete genomeputative PAS/PAC sensor protein8e-24110
NC_009077:1687304:169339616933961693830435Mycobacterium sp. JLS, complete genomeputative PAS/PAC sensor protein2e-23109
NC_013665:1766158:1787730178773017895681839Methanocella paludicola SANAE, complete genomeputative histidine kinase2e-0963.2
NC_017955:343931:360464360464361204741Modestobacter marinus, complete genomeResponse regulator with antiterminator output domain5e-0858.5
NC_014973:2894248:2897876289787628994951620Geobacter sp. M18 chromosome, complete genomemulti-sensor signal transduction histidine kinase3e-0755.5
NC_010995:948041:9877179877179905392823Cellvibrio japonicus Ueda107, complete genomeDiguanylate cyclase/phosphodiesterase domain 2 (EAL)4e-0755.5
NC_009659:1024201:1030147103014710320271881Janthinobacterium sp. Marseille chromosome, complete genomesensory box histidine kinase7e-0754.7
NC_009664:4423829:454938145493814550289909Kineococcus radiotolerans SRS30216, complete genomeresponse regulator receiver and ANTAR domain protein9e-0754.3
NC_013757:1499643:151650315165031517309807Geodermatophilus obscurus DSM 43160, complete genomeANTAR domain protein with unknown sensor3e-0652.8
NC_010830:692469:6969326969327038346903Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0652.4
NC_013729:6217500:623497362349736235746774Kribbella flavida DSM 17836, complete genomeANTAR domain protein with unknown sensor4e-0652
NC_003552:1492500:1513317151331715176874371Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase6e-0651.6
NC_017955:3057592:307736830773683078120753Modestobacter marinus, complete genomePAS/PAC sensor protein7e-0651.2
NC_017052:3073713:3073713307371330763672655Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeprotein PleD7e-0651.2
NC_017039:3073724:3073724307372430763782655Synechocystis sp. PCC 6803 substr. PCC-P, complete genomePleD gene product7e-0651.2
NC_000911:3075896:3075896307589630785502655Synechocystis sp. PCC 6803, complete genomePleD-like protein7e-0651.2
NC_015138:2299100:2312561231256123140841524Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completePAS/PAC sensor signal transduction histidine kinase8e-0650.8
NC_019962:1750497:1860145186014518626882544Natrinema pellirubrum DSM 15624, complete genomePAS domain S-box9e-0650.8