Pre_GI: BLASTP Hits

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Query: NC_006361:2920028:2937977 Nocardia farcinica IFM 10152, complete genome

Start: 2937977, End: 2939224, Length: 1248

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2751342:2769752276975227710591308Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transporter, membrane protein1e-77290
NC_011770:2804218:2816136281613628174461311Pseudomonas aeruginosa LESB58, complete genomeputative nrbE-like protein5e-69261
NC_016616:1182125:1187063118706311884001338Dechlorosoma suillum PS chromosome, complete genomearabinose efflux permease family protein2e-67256
NC_010943:9294:3122031220325541335Stenotrophomonas maltophilia K279a, complete genomeputative MFS family transporter protein4e-64245
NC_009380:3384737:3396406339640633977341329Salinispora tropica CNB-440 chromosome, complete genomemajor facilitator transporter2e-59229
NC_020157:36234:4601746017474081392Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequencemajor facilitator superfamily MFS_17e-28125
NC_008254:2496622:251445525144552515378924Mesorhizobium sp. BNC1, complete genomeputative NreB protein7e-25115
NC_020911:1776670:1778183177818317795051323Octadecabacter antarcticus 307, complete genomeputative MFS-type transporter1e-22107
NC_012668:3037345:304679030467903047173384Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-0860.5
NC_013093:2547608:2561488256148825626601173Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_12e-0653.9