Pre_GI: BLASTP Hits

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Query: NC_006155:2208686:2215440 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2215440, End: 2215808, Length: 369

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:2124185:213170121317012132069369Yersinia pseudotuberculosis PB1/+, complete genomeXRE family transcriptional regulator1e-66251
NC_020418:3022891:303662530366253036993369Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-38158
NC_012917:2971702:299238929923892992802414Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, XRE family8e-29125
NC_008781:3508784:351732735173273517707381Polaromonas naphthalenivorans CJ2, complete genomeputative transcriptional regulator, XRE family1e-1375.5
NC_013422:1755875:176364417636441764051408Halothiobacillus neapolitanus c2, complete genometranscriptional regulator, XRE family4e-1373.2
NC_004129:4093610:411130241113024111682381Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family2e-1167.8
NC_015410:2351464:237594023759402376296357Pseudomonas mendocina NK-01 chromosome, complete genomeregulatory protein8e-1062.4
NC_011750:2009889:201048920104892010950462Escherichia coli IAI39 chromosome, complete genomeputative DNA-binding protein from phage origin4e-0960.1
NC_017511:602000:607456607456607806351Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomePutative phage repressor phage associated protein3e-0857.4
NC_014323:961825:975609975609976046438Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA-binding repressor transcription regulator protein4e-0857
NC_012721:2694829:270527527052752705745471Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein6e-0856.2
NC_003902:3544743:355177835517783552206429Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-0755.1
NC_017513:997716:997716997716998093378Neisseria meningitidis G2136 chromosome, complete genomehypothetical protein3e-0753.9
NC_017505:1013311:102808210280821028459378Neisseria meningitidis alpha710 chromosome, complete genomeputative phage repressor3e-0753.9
NC_011002:703194:709760709760710110351Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative DNA-binding protein7e-0752.8
NC_014910:3727887:374055337405533740909357Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein2e-0650.8
NC_007963:1552761:156075215607521561435684Chromohalobacter salexigens DSM 3043, complete genomeputative phage repressor6e-0649.7