Pre_GI: BLASTP Hits

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Query: NC_005363:3562205:3570869 Bdellovibrio bacteriovorus HD100, complete genome

Start: 3570869, End: 3571267, Length: 399

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014310:1130344:113403411340341134387354Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein1e-2098.6
NC_011145:3750021:378026837802683780711444Anaeromyxobacter sp. K, complete genomehypothetical protein4e-1889.7
NC_013921:755800:768836768836769528693Thermoanaerobacter italicus Ab9 chromosome, complete genomeprotein of unknown function DUF3691e-1788.6
NC_002488:1638946:167004716700471670550504Xylella fastidiosa 9a5c, complete genomehypothetical protein2e-1787.4
NC_003295:659837:677809677809678165357Ralstonia solanacearum GMI1000, complete genomehypothetical protein4e-1786.7
NC_017195:2498113:251078125107812511134354Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein2e-1684.3
NC_015379:2482901:248920924892092489562354Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-1682.4
NC_016935:3819500:384980638498063850186381Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-1580.9
NC_015675:2247960:226966622696662270097432Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein8e-1579
NC_014964:1608575:162169916216991622379681Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein3e-1477.4
NC_010321:1616362:162948616294861630166681Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein3e-1477.4
NC_012691:2097287:211426221142622114762501Tolumonas auensis DSM 9187, complete genomehypothetical protein4e-1373.2
NC_004578:1719849:174157917415791742217639Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1272
NC_007355:923218:927027927027928010984Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein1e-1272
NC_010628:675445:689772689772690320549Nostoc punctiforme PCC 73102, complete genomehypothetical protein1e-1271.6
NC_003552:484000:493911493911494819909Methanosarcina acetivorans C2A, complete genomehypothetical protein3e-1167.4
NC_013521:2254534:226634422663442266898555Sanguibacter keddieii DSM 10542, complete genomehypothetical protein2e-0961.2
NC_013850:2357608:237926023792602379688429Klebsiella variicola At-22 chromosome, complete genomehypothetical protein5e-0856.6