Pre_GI: BLASTP Hits

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Query: NC_005363:3562205:3566053 Bdellovibrio bacteriovorus HD100, complete genome

Start: 3566053, End: 3566253, Length: 201

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016935:1868839:189543818954381895638201Paenibacillus mucilaginosus 3016 chromosome, complete genometautomerase1e-22104
NC_004547:913553:934497934497934700204Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative tautomerase2e-1167.4
NC_012917:833721:852892852892853098207Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4-oxalocrotonate tautomerase family enzyme3e-1167.4
NC_012846:1837924:186429118642911864500210Bartonella grahamii as4aup, complete genome4-oxalocrotonate tautomerase4e-1166.6
NC_013421:1038500:104124410412441041474231Pectobacterium wasabiae WPP163, complete genome4-oxalocrotonate tautomerase family enzyme3e-1063.9
NC_014228:4360676:436635443663544366560207Xenorhabdus nematophila ATCC 19061, complete genomeputative tautomerase K28e-1062.4
NC_020300:1344453:134741113474111347614204Bartonella australis Aust/NH1, complete genome4-oxalocrotonate tautomerase2e-0961.6
NC_008229:1149480:115937311593731159579207Helicobacter acinonychis str. Sheeba, complete genomeputative tautomerase6e-0856.2
NC_009832:2211154:224520822452082245426219Serratia proteamaculans 568, complete genome4-oxalocrotonate tautomerase family enzyme2e-0754.7
NC_015675:4565500:456826645682664568502237Mesorhizobium opportunistum WSM2075 chromosome, complete genome4-oxalocrotonate tautomerase8e-0752.4
NC_015222:2475792:247761524776152477803189Nitrosomonas sp. AL212 chromosome, complete genome4-oxalocrotonate tautomerase8e-0752.4
NC_010501:2609567:263716626371662637372207Pseudomonas putida W619, complete genome4-oxalocrotonate tautomerase family enzyme2e-0651.2