Pre_GI: BLASTP Hits

Some Help

Query: NC_005363:2172444:2175314 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2175314, End: 2175913, Length: 600

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017082:5925357:594456759445675945151585Bradyrhizobium sp. S23321, complete genomehypothetical protein4e-1374.7
NC_003063:1019674:104234710423471042919573Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-1065.9
NC_009997:3583166:358558335855833586296714Shewanella baltica OS195, complete genomeprotein of unknown function DUF8861e-0756.2
NC_016901:3530248:353398435339843534736753Shewanella baltica OS678 chromosome, complete genomehypothetical protein2e-0755.8
NC_011663:1709003:173716517371651737872708Shewanella baltica OS223 chromosome, complete genomehypothetical protein5e-0754.3
NC_020181:929000:929042929042929584543Enterobacter aerogenes EA1509E, complete genomeConserved hypothetical protein (perhaps related to histidine degradation)4e-0651.6
NC_008321:1523323:154824915482491548899651Shewanella sp. MR-4, complete genomeprotein of unknown function DUF8864e-0651.2