Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1626805 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1626805, End: 1627989, Length: 1185

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1887275:1905250190525019063981149Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative LPS biosynthesis protein WbpG0658
NC_009656:1994392:2017487201748720186291143Pseudomonas aeruginosa PA7 chromosome, complete genomeLPS biosynthesis protein WbpG0657
NC_009483:1936486:1961615196161519627571143Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein0639
NC_014640:6745873:6760689676068967618341146Achromobacter xylosoxidans A8 chromosome, complete genomeLPS biosynthesis protein WbpG9e-180629
NC_015424:3112637:3133519313351931346641146Aeromonas veronii B565 chromosome, complete genomeamidotransferase5e-160564
NC_015732:529201:5657535657535668921140Spirochaeta caldaria DSM 7334 chromosome, complete genomeN-acetyl sugar amidotransferase3e-139494
NC_011768:1718869:1737871173787117390101140Desulfatibacillum alkenivorans AK-01, complete genomePP-loop domain protein8e-128457
NC_005139:343500:3629043629043640551152Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein4e-122437
NC_002516:3519000:3533948353394835350811134Pseudomonas aeruginosa PAO1, complete genomeLPS biosynthesis protein WbpG8e-93340
NC_008781:3302934:3313711331371133148531143Polaromonas naphthalenivorans CJ2, complete genomeLPS biosynthesis protein WbpG5e-90331
NC_008380:855246:8889228889228900821161Rhizobium leguminosarum bv. viciae 3841, complete genomeputative lipopolysaccharide synthesis protein1e-83310
NC_015703:4531578:4556271455627145573981128Runella slithyformis DSM 19594 chromosome, complete genomeN-acetyl sugar amidotransferase4e-66252
NC_009850:661802:6800756800756812471173Arcobacter butzleri RM4018, complete genomeputative LPS biosynthesis protein WbpG3e-54212
NC_014323:4792048:4807883480788348091151233Herbaspirillum seropedicae SmR1 chromosome, complete genomecell cycle control ATPase1e-53210
NC_009659:2523874:2542093254209325432411149Janthinobacterium sp. Marseille chromosome, complete genomeLPS biosynthesis protein WbpG5e-51201
NC_018645:4277393:4296258429625842973581101Desulfobacula toluolica Tol2, complete genomehypothetical protein9e-21101
NC_019977:1456366:1472871147287114739471077Methanomethylovorans hollandica DSM 15978, complete genomeputative ATPase of the PP-loop superfamily implicated in cell cycle control4e-1582.8
NC_010645:73573:8591385913878561944Bordetella avium 197N, complete genomelipopolysaccharide biosynthesis protein6e-1479
NC_013522:698114:7114587114587126301173Thermanaerovibrio acidaminovorans DSM 6589, complete genomeLPS biosynthesis protein4e-1272.8
NC_013722:1785692:1785692178569217885172826Xanthomonas albilineans, complete genomeamino acid adenylation;albicidin synthetase protein5e-1272.4
NC_012108:4118888:4130348413034841313581011Desulfobacterium autotrophicum HRM2, complete genomeputative ATPAse of LPS biosynthesis7e-1272
NC_013061:4712051:4734063473406347353161254Pedobacter heparinus DSM 2366, complete genomeputative LPS biosynthesis protein2e-1170.5
NC_013061:4712051:4736801473680147379311131Pedobacter heparinus DSM 2366, complete genomeLPS biosynthesis protein WbpG3e-1066.6
NC_013194:69634:8482584825868792055Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeglutamine amidotransferase class-II3e-1066.6
NC_005139:305420:3295243295243306601137Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein1e-0964.3
NC_005139:305420:3282523282523295201269Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein1e-0861.2
NC_005071:87907:1123301123301135771248Prochlorococcus marinus str. MIT 9313, complete genomeLPS biosynthesis protein5e-0859.3
NC_000868:1730820:173368317336831734507825Pyrococcus abyssi GE5, complete genomehypothetical protein5e-0859.3
NC_005070:419261:4383264383264394291104Synechococcus sp. WH 8102, complete genomehypothetical protein4e-0756.2
NC_016620:341699:3770423770423782141173Bacteriovorax marinus SJ, complete genomeputative LPS biosynthesis glycosyl transferase protein1e-0654.7
NC_008820:1766973:1773623177362317747531131Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein1e-0654.7
NC_004757:2412161:2424692242469224257621071Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein2e-0653.9
NC_017187:641822:6532026532026543621161Arcobacter butzleri ED-1, complete genomeLPS biosynthesis protein3e-0653.1
NC_016588:133943:1464531464531477631311Azospirillum lipoferum 4B plasmid AZO_p6, complete sequencehypothetical protein8e-0652