Pre_GI: BLASTP Hits

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Query: NC_005244:37546:57221 Pseudomonas sp. ND6 plasmid pND6-1, complete sequence

Start: 57221, End: 57805, Length: 585

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. In the latter form the single cell can display an extremely high motility due to its polar flagella. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Typically they are plant pathogens, although several strains are pathogenic to humans. These bacteria share a high degree of homology to Pseudomonas aeruginosa strains. However, key virulence factors like certain exotoxin genes and type III secretion systems are absent, which makes these bacteria non-pathogenic in nature. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008781:2611702:262216926221692622753585Polaromonas naphthalenivorans CJ2, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-90330
NC_008782:3252092:326343132634313264015585Acidovorax sp. JS42, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit4e-86317
NC_015554:4002952:400756740075674008154588Alteromonas sp. SN2 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-33142
NC_015563:1951368:196159219615921962110519Delftia sp. Cs1-4 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta4e-1477.8
NC_015580:3252534:326749432674943268018525Novosphingobium sp. PP1Y, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta7e-1373.6
NC_016604:3137694:315275531527553153318564Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase3e-1168.2
NC_009338:686932:703451703451704047597Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta6e-1167.4
NC_008705:1752180:176454617645461765142597Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit8e-1167
NC_008146:1748026:176039217603921760988597Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit8e-1167
NC_009338:603663:620497620497621096600Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta7e-1167
NC_008726:494769:506675506675507271597Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-1066.2
NC_014814:132404:144338144338144937600Mycobacterium sp. Spyr1 chromosome, complete genomephthalate 3,4-dioxygenase, beta subunit4e-1064.7
NC_009077:1687304:170002217000221700621600Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit4e-1064.7
NC_016947:1480282:148028214802821480869588Mycobacterium intracellulare MOTT-02 chromosome, complete genome3-phenylpropionate dioxygenase subunit beta2e-0962.4
NC_014814:169374:186725186725187267543Mycobacterium sp. Spyr1 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase1e-0859.7
NC_016604:3184855:319191231919123192454543Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase1e-0859.3
NC_014974:1076565:108904410890441089556513Thermus scotoductus SA-01 chromosome, complete genome3-phenylpropionate dioxygenase subunit beta2e-0858.9
NC_016582:9050528:906109190610919061573483Streptomyces bingchenggensis BCW-1 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-0858.5
NC_009077:1725683:174370017437001744242543Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-0858.2
NC_008705:1790222:180823918082391808781543Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-0858.2
NC_008726:549102:568557568557569099543Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-0858.2
NC_008146:1748026:180520618052061805748543Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-0858.2
NC_009338:555587:585973585973586515543Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-0858.2
NC_009338:630130:659657659657660199543Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-0858.2
NC_014098:2971011:298169529816952982207513Bacillus tusciae DSM 2912 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase beta subunit3e-0858.2
NC_010170:1551923:156165215616521562170519Bordetella petrii, complete genomeBiphenyl dioxygenase small subunit2e-0755.1
NC_016604:3184855:321250332125033213021519Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase3e-0754.7
NC_009077:1725683:176427717642771764795519Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-0653.1
NC_008705:1790222:183420218342021834720519Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-0653.1
NC_009338:555587:565420565420565938519Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-0652.8
NC_009077:2308634:233356623335662334075510Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-0652