Pre_GI: BLASTP Hits

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Query: NC_005244:37546:45547 Pseudomonas sp. ND6 plasmid pND6-1, complete sequence

Start: 45547, End: 47316, Length: 1770

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. In the latter form the single cell can display an extremely high motility due to its polar flagella. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Typically they are plant pathogens, although several strains are pathogenic to humans. These bacteria share a high degree of homology to Pseudomonas aeruginosa strains. However, key virulence factors like certain exotoxin genes and type III secretion systems are absent, which makes these bacteria non-pathogenic in nature. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009720:4087831:4100116410011641014651350Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-1480.9
NC_009720:4033983:4037876403787640392281353Xanthobacter autotrophicus Py2, complete genomemethyltransferase type 114e-1480.1
NC_011894:3671162:368715036871503687914765Methylobacterium nodulans ORS 2060, complete genometype I restriction-modification system methyltransferase subunit-like protein6e-1169.7
NC_002128:35000:457244572446287564Escherichia coli O157:H7 str. Sakai plasmid pO157, completehypothetical protein1e-1068.6
NC_007414:56508:682996829968862564Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein1e-1068.6
NC_015590:1425628:1425628142562814275651938Sinorhizobium meliloti AK83 chromosome 1, complete sequencemethyltransferase small4e-0963.5
NC_008826:170609:1959941959941973491356Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein9e-0755.8
NC_007434:3973145:399854039985403999346807Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein2e-0655.1
NC_013971:3296272:330297433029743303807834Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-0654.3
NC_013961:441719:467493467493468326834Erwinia amylovora, complete genomehypothetical protein3e-0654.3