Pre_GI: BLASTP Hits

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Query: NC_005139:796546:818704 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 818704, End: 819915, Length: 1212

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009052:4335754:4344644434464443458491206Shewanella baltica OS155, complete genomeanticodon nuclease2e-156552
NC_012912:1053618:1074712107471210758841173Dickeya zeae Ech1591, complete genomeanticodon nuclease4e-140498
NC_010682:460523:4819094819094830091101Ralstonia pickettii 12J chromosome 1, complete sequenceanticodon nuclease4e-130464
NC_016803:3502749:3530225353022535313641140Desulfovibrio desulfuricans ND132 chromosome, complete genomeanticodon nuclease4e-123441
NC_006513:1547092:1553852155385215550421191Azoarcus sp. EbN1, complete genomeanticodon nuclease5e-121434
NC_007508:570000:5779635779635791291167Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative anticodon nuclease4e-100365
NC_012491:743883:7541457541457553411197Brevibacillus brevis NBRC 100599, complete genomeanticodon nuclease5e-51202
NC_010645:558974:5677405677405689421203Bordetella avium 197N, complete genomeanticodon nuclease3e-44179
NC_007778:3470661:3483476348347634846811206Rhodopseudomonas palustris HaA2, complete genomeAnticodon nuclease PrrC5e-44179
NC_005823:1105524:1121249112124911224001152Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130anticodon nuclease4e-42172
NC_016514:506611:5224495224495236481200Enterobacter cloacae EcWSU1 chromosome, complete genomeanticodon nuclease9e-42171
NC_010278:315941:3263253263253274401116Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,anticodon nuclease2e-41170
NC_010571:1334000:1343820134382013449711152Opitutus terrae PB90-1, complete genomeanticodon nuclease2e-41170
NC_010939:321492:3311433311433322581116Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeAnticodon nuclease6e-41168
NC_017033:678321:6869106869106880461137Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein7e-40165
NC_003112:844000:8563158563158574571143Neisseria meningitidis MC58, complete genomeanticodon nuclease9e-39161
NC_017516:1439775:1446605144660514477471143Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein9e-39161
NC_016589:183432:2029662029662040961131Burkholderia sp. YI23 chromosome 1, complete sequenceanticodon nuclease8e-39161
NC_007086:557789:5673845673845684841101Xanthomonas campestris pv. campestris str. 8004, complete genomeanticodon nuclease3e-35149
NC_003902:555699:5652945652945663941101Xanthomonas campestris pv. campestris str. ATCC 33913, completeanticodon nuclease3e-35149
NC_008571:744500:7496007496007506791080Gramella forsetii KT0803, complete genomeanticodon nuclease8e-28125
NC_004342:3164500:317929431792943179851558Leptospira interrogans serovar Lai str. 56601 chromosome I,anticodon nuclease5e-1375.9