Pre_GI: BLASTP Hits

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Query: NC_005139:305420:329524 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 329524, End: 330660, Length: 1137

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012108:4118888:4130348413034841313581011Desulfobacterium autotrophicum HRM2, complete genomeputative ATPAse of LPS biosynthesis1e-50200
NC_016620:341699:3770423770423782141173Bacteriovorax marinus SJ, complete genomeputative LPS biosynthesis glycosyl transferase protein4e-49195
NC_013061:4712051:4736801473680147379311131Pedobacter heparinus DSM 2366, complete genomeLPS biosynthesis protein WbpG6e-48191
NC_008820:1766973:1773623177362317747531131Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein2e-47189
NC_013061:4712051:4734063473406347353161254Pedobacter heparinus DSM 2366, complete genomeputative LPS biosynthesis protein1e-46187
NC_005070:419261:4383264383264394291104Synechococcus sp. WH 8102, complete genomehypothetical protein9e-47187
NC_013522:698114:7114587114587126301173Thermanaerovibrio acidaminovorans DSM 6589, complete genomeLPS biosynthesis protein2e-44180
NC_005139:305420:3282523282523295201269Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein3e-42172
NC_015572:1252000:1264075126407512653161242Methylomonas methanica MC09 chromosome, complete genomeN-acetyl sugar amidotransferase1e-37157
NC_012997:1335902:1357080135708013583721293Teredinibacter turnerae T7901, complete genomehypothetical protein4e-37155
NC_020304:2677372:2729208272920827305691362Desulfocapsa sulfexigens DSM 10523, complete genomeN-acetyl sugar amidotransferase8e-37154
NC_016588:133943:1464531464531477631311Azospirillum lipoferum 4B plasmid AZO_p6, complete sequencehypothetical protein2e-35150
NC_005071:87907:1123301123301135771248Prochlorococcus marinus str. MIT 9313, complete genomeLPS biosynthesis protein1e-33144
NC_017187:641822:6532026532026543621161Arcobacter butzleri ED-1, complete genomeLPS biosynthesis protein2e-32140
NC_008319:171847:1858211858211871491329Synechococcus sp. CC9311, complete genomehypothetical protein1e-31137
NC_011060:514874:5199355199355212571323Pelodictyon phaeoclathratiforme BU-1, complete genomeLPS biosynthesis protein, PseA-like protein1e-27124
NC_008820:91967:1079231079231092931371Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-22105
NC_013722:1785692:1785692178569217885172826Xanthomonas albilineans, complete genomeamino acid adenylation;albicidin synthetase protein4e-1479.3
NC_019977:1456366:1472871147287114739471077Methanomethylovorans hollandica DSM 15978, complete genomeputative ATPase of the PP-loop superfamily implicated in cell cycle control1e-1274.3
NC_004757:2412161:2424692242469224257621071Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein2e-1273.9
NC_015424:3112637:3133519313351931346641146Aeromonas veronii B565 chromosome, complete genomeamidotransferase4e-1272.8
NC_015732:529201:5657535657535668921140Spirochaeta caldaria DSM 7334 chromosome, complete genomeN-acetyl sugar amidotransferase5e-1272.4
NC_008781:3302934:3313711331371133148531143Polaromonas naphthalenivorans CJ2, complete genomeLPS biosynthesis protein WbpG5e-1168.9
NC_015703:4531578:4556271455627145573981128Runella slithyformis DSM 19594 chromosome, complete genomeN-acetyl sugar amidotransferase1e-1067.8
NC_008380:855246:8889228889228900821161Rhizobium leguminosarum bv. viciae 3841, complete genomeputative lipopolysaccharide synthesis protein2e-1067.4
NC_009656:1994392:2017487201748720186291143Pseudomonas aeruginosa PA7 chromosome, complete genomeLPS biosynthesis protein WbpG2e-1066.6
NC_011768:1718869:1737871173787117390101140Desulfatibacillum alkenivorans AK-01, complete genomePP-loop domain protein3e-1066.2
NC_018645:4277393:4296258429625842973581101Desulfobacula toluolica Tol2, complete genomehypothetical protein3e-1066.2
NC_002516:3519000:3533948353394835350811134Pseudomonas aeruginosa PAO1, complete genomeLPS biosynthesis protein WbpG4e-1066.2
NC_015379:1887275:1905250190525019063981149Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative LPS biosynthesis protein WbpG6e-1065.5
NC_005363:1604337:1626805162680516279891185Bdellovibrio bacteriovorus HD100, complete genomeLPS biosynthesis protein WbpG1e-0964.3
NC_005139:343500:3629043629043640551152Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein2e-0963.5
NC_009483:1936486:1961615196161519627571143Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-0962.8
NC_010645:73573:8591385913878561944Bordetella avium 197N, complete genomelipopolysaccharide biosynthesis protein8e-0961.6
NC_014323:4792048:4807883480788348091151233Herbaspirillum seropedicae SmR1 chromosome, complete genomecell cycle control ATPase1e-0861.6
NC_014640:6745873:6760689676068967618341146Achromobacter xylosoxidans A8 chromosome, complete genomeLPS biosynthesis protein WbpG1e-0861.2
NC_009659:2523874:2542093254209325432411149Janthinobacterium sp. Marseille chromosome, complete genomeLPS biosynthesis protein WbpG7e-0858.5
NC_013194:69634:8482584825868792055Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeglutamine amidotransferase class-II1e-0757.8
NC_009850:661802:6800756800756812471173Arcobacter butzleri RM4018, complete genomeputative LPS biosynthesis protein WbpG2e-0757
NC_016803:3502749:3504727350472735062021476Desulfovibrio desulfuricans ND132 chromosome, complete genomehypothetical protein2e-0653.5