Pre_GI: BLASTP Hits

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Query: NC_005139:305420:328252 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 328252, End: 329520, Length: 1269

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013061:4712051:4734063473406347353161254Pedobacter heparinus DSM 2366, complete genomeputative LPS biosynthesis protein3e-112405
NC_016620:341699:3770423770423782141173Bacteriovorax marinus SJ, complete genomeputative LPS biosynthesis glycosyl transferase protein3e-79295
NC_013522:698114:7114587114587126301173Thermanaerovibrio acidaminovorans DSM 6589, complete genomeLPS biosynthesis protein8e-49194
NC_005071:87907:1123301123301135771248Prochlorococcus marinus str. MIT 9313, complete genomeLPS biosynthesis protein8e-42171
NC_012108:4118888:4130348413034841313581011Desulfobacterium autotrophicum HRM2, complete genomeputative ATPAse of LPS biosynthesis2e-40166
NC_005139:305420:3295243295243306601137Vibrio vulnificus YJ016 chromosome I, complete sequenceputitive LPS biosynthesis protein3e-40166
NC_017187:641822:6532026532026543621161Arcobacter butzleri ED-1, complete genomeLPS biosynthesis protein1e-36154
NC_015572:1252000:1264075126407512653161242Methylomonas methanica MC09 chromosome, complete genomeN-acetyl sugar amidotransferase1e-36154
NC_012997:1335902:1357080135708013583721293Teredinibacter turnerae T7901, complete genomehypothetical protein9e-33141
NC_016588:133943:1464531464531477631311Azospirillum lipoferum 4B plasmid AZO_p6, complete sequencehypothetical protein2e-32140
NC_008820:1766973:1773623177362317747531131Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein9e-32138
NC_013061:4712051:4736801473680147379311131Pedobacter heparinus DSM 2366, complete genomeLPS biosynthesis protein WbpG9e-32138
NC_008319:171847:1858211858211871491329Synechococcus sp. CC9311, complete genomehypothetical protein3e-29130
NC_020304:2677372:2729208272920827305691362Desulfocapsa sulfexigens DSM 10523, complete genomeN-acetyl sugar amidotransferase2e-29130
NC_005070:419261:4383264383264394291104Synechococcus sp. WH 8102, complete genomehypothetical protein2e-28127
NC_011060:514874:5199355199355212571323Pelodictyon phaeoclathratiforme BU-1, complete genomeLPS biosynthesis protein, PseA-like protein2e-28127
NC_008820:91967:1079231079231092931371Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein3e-22106
NC_018645:4277393:4296258429625842973581101Desulfobacula toluolica Tol2, complete genomehypothetical protein2e-1273.9
NC_010645:73573:8591385913878561944Bordetella avium 197N, complete genomelipopolysaccharide biosynthesis protein3e-0963.5
NC_009656:1994392:2017487201748720186291143Pseudomonas aeruginosa PA7 chromosome, complete genomeLPS biosynthesis protein WbpG5e-0859.3
NC_011768:1718869:1737871173787117390101140Desulfatibacillum alkenivorans AK-01, complete genomePP-loop domain protein9e-0858.5
NC_014323:4792048:4807883480788348091151233Herbaspirillum seropedicae SmR1 chromosome, complete genomecell cycle control ATPase5e-0756.2
NC_009850:661802:6800756800756812471173Arcobacter butzleri RM4018, complete genomeputative LPS biosynthesis protein WbpG3e-0653.5
NC_004757:2412161:2424692242469224257621071Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein4e-0653.1
NC_013722:1785692:1785692178569217885172826Xanthomonas albilineans, complete genomeamino acid adenylation;albicidin synthetase protein8e-0652