Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2240691 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2240691, End: 2241788, Length: 1098

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:2568027:2573488257348825745341047Acidovorax sp. JS42, complete genomePolysulphide reductase, NrfD4e-28125
NC_011294:1723852:1758767175876717597891023Salmonella enterica subsp. enterica serovar Enteritidis strtetrathionate reductase subunit C1e-23110
NC_011205:1852665:1887579188757918886011023Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tetrathionate reductase complex subunit C1e-23110
NC_010102:1616530:1651480165148016525021023Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-23110
NC_012125:2360815:2395704239570423967261023Salmonella enterica subsp. enterica serovar Paratyphi C straintetrathionate reductase subunit C1e-23110
NC_011147:1502096:1537046153704615380681023Salmonella enterica subsp. enterica serovar Paratyphi A strtetrathionate reductase subunit C2e-23110
NC_006511:1506915:1541865154186515428871023Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtetrathionate reductase subunit C (membrane protein)2e-23110
NC_016616:2644883:2656153265615326572231071Dechlorosoma suillum PS chromosome, complete genomeformate-dependent nitrite reductase, membrane component2e-22107
NC_007626:3522265:3565206356520635663001095Magnetospirillum magneticum AMB-1, complete genometetrathionate reductase subunit C1e-1997.4