Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2235864 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2235864, End: 2236619, Length: 756

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004603:370320:377275377275378027753Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein4e-45181
NC_004605:741000:741193741193741939747Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein2e-42172
NC_004603:1961432:1965403196540319671181716Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein7e-1270.9
NC_007626:3522265:3581103358110335821881086Magnetospirillum magneticum AMB-1, complete genomePredicted signal transduction protein containing sensor and EAL domains1e-0860.5
NC_015968:2195645:2228558222855822305191962Enterobacter asburiae LF7a chromosome, complete genomediguanylate cyclase/phosphodiesterase3e-0755.8
NC_010678:114000:1299081299081320792172Ralstonia pickettii 12J chromosome 2, complete sequencePTS system, lactose/cellobiose family IIC subunit1e-0653.9
NC_012857:557911:5737025737025758732172Ralstonia pickettii 12D chromosome 2, complete genomePTS system, lactose/cellobiose family IIC subunit1e-0653.9
NC_017192:1137724:1153417115341711559092493Arcobacter sp. L, complete genomeEAL/GGDEF/PAS domain-containing protein9e-0650.8