Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1829434 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1829434, End: 1830420, Length: 987

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:1405381:141816514181651419064900Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-30133
NC_011601:717072:729618729618730442825Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-24111
NC_009832:4269804:429559242955924296500909Serratia proteamaculans 568, complete genomehypothetical protein5e-2099
NC_009792:1770106:178786317878631788777915Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1997.8