Pre_GI: BLASTP Hits

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Query: NC_005126:4824500:4842062 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4842062, End: 4843321, Length: 1260

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009253:529494:530341530341531207867Desulfotomaculum reducens MI-1 chromosome, complete genomeputative agmatinase3e-1583.2
NC_003296:1980687:198068719806871981643957Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE AGMATINASE PROTEIN4e-1479.3
NC_010830:1451887:1470391147039114714341044Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein5e-1479.3
NC_011661:1411383:142796814279681428855888Dictyoglomus turgidum DSM 6724, complete genomeagmatinase9e-1478.6
NC_011297:1224749:124769412476941248587894Dictyoglomus thermophilum H-6-12, complete genomeagmatinase1e-1274.7
NC_015588:2468207:2474766247476624759921227Isoptericola variabilis 225 chromosome, complete genomeagmatinase2e-1273.9
NC_015588:2468207:2473514247351424747191206Isoptericola variabilis 225 chromosome, complete genomeagmatinase3e-1273.2
NC_002951:2208813:222541622254162226324909Staphylococcus aureus subsp. aureus COL, complete genomearginase1e-1171.6
NC_017341:2303005:231961023196102320518909Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,arginase1e-1171.6
NC_010163:1361217:137364713736471374516870Acholeplasma laidlawii PG-8A chromosome, complete genomeputative agmatinase1e-1171.2
NC_015152:1602412:162227516222751623132858Spirochaeta sp. Buddy chromosome, complete genomeagmatinase2e-1170.9
NC_007760:2897409:2915968291596829169931026Anaeromyxobacter dehalogenans 2CP-C, complete genomeArginase/agmatinase/formiminoglutamase2e-1170.5
NC_011567:139598:150895150895151791897Anoxybacillus flavithermus WK1, complete genomeArginase3e-1170.1
NC_017188:3839478:385961138596113860501891Bacillus amyloliquefaciens TA208 chromosome, complete genomearginase6e-1168.9
NC_017191:3841170:386130338613033862193891Bacillus amyloliquefaciens XH7 chromosome, complete genomearginase6e-1168.9
NC_020210:1275031:131217413121741313139966Geobacillus sp. GHH01, complete genomeguanidinobutyrase1e-1067.8
NC_014915:1909275:195329219532921954266975Geobacillus sp. Y412MC52 chromosome, complete genomeagmatinase4e-1066.2
NC_005126:4333767:433474343347434335678936Photorhabdus luminescens subsp. laumondii TTO1, complete genomeagmatinase4e-1066.2
NC_017208:108134:161835161835162728894Bacillus thuringiensis serovar chinensis CT-43 chromosome, completearginase4e-1066.2
NC_014171:109280:160072160072160965894Bacillus thuringiensis BMB171 chromosome, complete genomearginase4e-1066.2
NC_016779:3418538:342260634226063423577972Bacillus cereus F837/76 chromosome, complete genomeFormiminoglutamase7e-1065.5
NC_012581:803456:827115827115828086972Bacillus anthracis str. CDC 684 chromosome, complete genomeformimidoylglutamase9e-1065.1
NC_015321:4142843:4159547415954741605991053Fluviicola taffensis DSM 16823 chromosome, complete genomeAgmatinase3e-0963.2
NC_009142:6729512:6749960674996067509611002Saccharopolyspora erythraea NRRL 2338, complete genomeagmatinase, putative6e-0962.4
NC_020244:3681236:369081036908103691682873Bacillus subtilis XF-1, complete genomeagmatinase7e-0962.4
NC_013222:432947:435743435743436615873Robiginitalea biformata HTCC2501, complete genomearginase9e-0962
NC_013894:672840:6819136819136830071095Thermocrinis albus DSM 14484 chromosome, complete genomeArginase/agmatinase/formiminoglutamase2e-0860.8
NC_014551:3797047:381859538185953819545951Bacillus amyloliquefaciens DSM 7, complete genomeformiminoglutamate hydrolase2e-0860.8
NC_017188:3764061:378679637867963787746951Bacillus amyloliquefaciens TA208 chromosome, complete genomeformimidoylglutamase2e-0860.8
NC_017190:3812065:383361738336173834567951Bacillus amyloliquefaciens LL3 chromosome, complete genomeformiminoglutamate hydrolase2e-0860.8
NC_017191:3766960:378848837884883789438951Bacillus amyloliquefaciens XH7 chromosome, complete genomeformimidoylglutamase2e-0860.8
NC_012856:2266187:228480422848042285763960Ralstonia pickettii 12D chromosome 1, complete genomeagmatinase3e-0860.5
NC_019842:3594409:360558936055893606461873Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,agmatinase6e-0859.3
NC_020134:1941523:195930419593041960155852Clostridium stercorarium subsp. stercorarium DSM 8532, completeagmatinase SpeB6e-0859.3
NC_009725:3559257:357043635704363571308873Bacillus amyloliquefaciens FZB42, complete genomeSpeB6e-0859.3
NC_014666:7222000:7223404722340472245041101Frankia sp. EuI1c chromosome, complete genomeagmatinase6e-0858.9
NC_020410:3547345:356447335644733565345873Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeagmatinase7e-0858.9
NC_015275:1573916:157624115762411577098858Clostridium lentocellum DSM 5427 chromosome, complete genomeagmatinase7e-0858.9
NC_007494:867901:868720868720869682963Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceputative agmatinase1e-0758.5
NC_009338:817854:8178548178548188671014Mycobacterium gilvum PYR-GCK chromosome, complete genomeputative agmatinase1e-0758.5
NC_013744:300000:3076783076783086851008Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeArginase/agmatinase/formiminoglutamase2e-0757.8
NC_013156:127000:137812137812138666855Methanocaldococcus fervens AG86, complete genomeagmatinase2e-0757
NC_012673:1540000:154791515479151548817903Exiguobacterium sp. AT1b, complete genomearginase3e-0756.6
NC_010184:5120359:513921351392135140085873Bacillus weihenstephanensis KBAB4, complete genomeputative agmatinase5e-0755.8
NC_010943:325739:341542341542342462921Stenotrophomonas maltophilia K279a, complete genomeputative arginase7e-0755.5
NC_011958:923789:923789923789924751963Rhodobacter sphaeroides KD131 chromosome 2, complete genomeAgmatinase1e-0654.7
NC_009482:2109270:212653421265342127403870Synechococcus sp. RCC307 chromosome, complete genomeagmatinase2e-0654.3
NC_014964:1169925:118626111862611187127867Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeagmatinase1e-0654.3
NC_014538:1311500:131297713129771313843867Thermoanaerobacter sp. X513 chromosome, complete genomeagmatinase1e-0654.3
NC_010320:1585974:160053916005391601405867Thermoanaerobacter sp. X514 chromosome, complete genomeputative agmatinase1e-0654.3
NC_010321:1177238:119407011940701194936867Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeputative agmatinase1e-0654.3
NC_010718:2977021:2980253298025329812541002Natranaerobius thermophilus JW/NM-WN-LF, complete genomeagmatinase9e-0651.6